Gene Vapar_6098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6098 
Symbol 
ID7975544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp814924 
End bp815442 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content75% 
IMG OID644796654 
Productphosphonate C-P lyase system protein PhnG 
Protein accessionYP_002947928 
Protein GI239820743 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3624] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID[TIGR03293] phosphonate C-P lyase system protein PhnG 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.889087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCATG CCTTTGACAC AGAACCCGCG GCCCGCCCGC TGCGCCGCGC GCAGTGGCTC 
GCGATGCTGG CGCGCGCGCC CGTCTCGCTG CTCGAACCGG CGCTCGCGCC CCACGCCGAG
ACCCCGCCCC AGTGGCTGCG TGCGCCCGAG ACCGGCCTGG TGATGGTGCA GGGCCGCGCC
GGCGGCACCG GCGAGCGCTT CAACCTGGGC GAGGTGACGG TCACGCGCTG CGCGCTGCGC
CTGGGCGGCA CCGCGCCGCA GCCGGGCGCC GCGGTGGGCG TGGCCTATGT GCTCGGCCGT
TCGCACCGCC ATGCACAGCT CGCGGCCGTG GCCGACGCGC TGCTGCAGGA CCCGGCGCAG
CAGGCCGTGC TCGATGCCCG GCTGCTGGCA CCCGTGCGTG CGCATCTCGC GGCGCTGCGC
GCACAGCGCC ATGCACGCGC CCAGGCCAGC AAGGTCGAGT TCTTCACGGT GGCGCGCGAA
GCCGGCGGCG CCGACATGGA CGAGGACGAT TCCGAATGA
 
Protein sequence
MFHAFDTEPA ARPLRRAQWL AMLARAPVSL LEPALAPHAE TPPQWLRAPE TGLVMVQGRA 
GGTGERFNLG EVTVTRCALR LGGTAPQPGA AVGVAYVLGR SHRHAQLAAV ADALLQDPAQ
QAVLDARLLA PVRAHLAALR AQRHARAQAS KVEFFTVARE AGGADMDEDD SE