Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6098 |
Symbol | |
ID | 7975544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 814924 |
End bp | 815442 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644796654 |
Product | phosphonate C-P lyase system protein PhnG |
Protein accession | YP_002947928 |
Protein GI | 239820743 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3624] Uncharacterized enzyme of phosphonate metabolism |
TIGRFAM ID | [TIGR03293] phosphonate C-P lyase system protein PhnG |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.889087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCATG CCTTTGACAC AGAACCCGCG GCCCGCCCGC TGCGCCGCGC GCAGTGGCTC GCGATGCTGG CGCGCGCGCC CGTCTCGCTG CTCGAACCGG CGCTCGCGCC CCACGCCGAG ACCCCGCCCC AGTGGCTGCG TGCGCCCGAG ACCGGCCTGG TGATGGTGCA GGGCCGCGCC GGCGGCACCG GCGAGCGCTT CAACCTGGGC GAGGTGACGG TCACGCGCTG CGCGCTGCGC CTGGGCGGCA CCGCGCCGCA GCCGGGCGCC GCGGTGGGCG TGGCCTATGT GCTCGGCCGT TCGCACCGCC ATGCACAGCT CGCGGCCGTG GCCGACGCGC TGCTGCAGGA CCCGGCGCAG CAGGCCGTGC TCGATGCCCG GCTGCTGGCA CCCGTGCGTG CGCATCTCGC GGCGCTGCGC GCACAGCGCC ATGCACGCGC CCAGGCCAGC AAGGTCGAGT TCTTCACGGT GGCGCGCGAA GCCGGCGGCG CCGACATGGA CGAGGACGAT TCCGAATGA
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Protein sequence | MFHAFDTEPA ARPLRRAQWL AMLARAPVSL LEPALAPHAE TPPQWLRAPE TGLVMVQGRA GGTGERFNLG EVTVTRCALR LGGTAPQPGA AVGVAYVLGR SHRHAQLAAV ADALLQDPAQ QAVLDARLLA PVRAHLAALR AQRHARAQAS KVEFFTVARE AGGADMDEDD SE
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