| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6029 |
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| Symbol | |
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| ID | 7975314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 753471 |
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| End bp | 754421 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644796589 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947863 |
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| Protein GI | 239820678 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0205885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGGCC TGCTGGCCGC CTCGGCGGCG CCGTCGCTCT GGCCCGTGCC TGCCCGCGCG
CAGGAGGCGT GGCCCACGCG GCCCCTCACC GTGATCGTTC CCTTCGCGCC GGGCGGCGCG
GGCAATGGGT CCGTGCGCAT CCTGGCCGAG CTGATCGGGC CGCGCATCGG CCAGCCGCTG
GTGGTCGACA ACCGGCCGGG TGCGGGCGGC ATCACCGGCA CCGCGATGGT GGCCTCGAGC
AATGACGACC ACATGCTGCT GATGGGCAGC ACCACCATGA CCATCCTGCC GGCGCTGCGC
AGCGACCTCG GCTACGACGT GCAGCGCGAC CTGCAGCCGG TGGGCATGAT CTCGACGCAG
CCGCTGGTGC TGGCCGTGGG CGCTGGTTCG CCGGTGCGCA GCCTCGACGA TCTCGTGGCG
CGCGGCCGCG CGGGCGAGCT GAGCGCCGGC AACAGCGGCG TCGGCACGCT CTCTCACCTG
GCCACCGAGC TGCTCAACCG CAAGCTCGGC ACGCGCCTGC TGCCGGTGCC CTACAAGGGC
GACAGCGTGC TGATCCCCGA TGTCGCGGCG GGCACCGTCT CCGTGGGCGT GATGAATCTT
CCGGTCGCGC TGCCGCTGGT CCAGGCCGGC CGCCTGCGCG CGGTGGCCGT CACCTCGGCG
CAGCCCCTCG CGGGCCTGCC CGGTGTGCCG GTGCTGCGCT CGCTCGGCCA GGAGTTCGTC
ATCTCCGGCT GGGCCGCACT CTTTGCGGGC CGCAAGGTGC CCGCGGCGGG CGTGGCGCGG
CTCGAGAAGC TGCTGCGCGA AGCCATGGAC ACGCCGGCCG TGCGCGAGCG CTTCGCCAGC
TTCGGCGTGA CGCCGTCGGC TTCGACACCA TCGCAGCTGC GCGAGTACGT CCGCAACGAA
ACCGCGCGGT GGGGAGACGT GGTGCGCAGC CGCGGCATCA AGCTCGAGTG A
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| Protein sequence | MLGLLAASAA PSLWPVPARA QEAWPTRPLT VIVPFAPGGA GNGSVRILAE LIGPRIGQPL
VVDNRPGAGG ITGTAMVASS NDDHMLLMGS TTMTILPALR SDLGYDVQRD LQPVGMISTQ
PLVLAVGAGS PVRSLDDLVA RGRAGELSAG NSGVGTLSHL ATELLNRKLG TRLLPVPYKG
DSVLIPDVAA GTVSVGVMNL PVALPLVQAG RLRAVAVTSA QPLAGLPGVP VLRSLGQEFV
ISGWAALFAG RKVPAAGVAR LEKLLREAMD TPAVRERFAS FGVTPSASTP SQLREYVRNE
TARWGDVVRS RGIKLE
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