| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6004 |
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| Symbol | |
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| ID | 7975289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 727191 |
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| End bp | 728687 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796565 |
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| Product | Microcystin LR degradation protein MlrC-like protein |
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| Protein accession | YP_002947839 |
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| Protein GI | 239820654 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5476] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACA AAGCCCCCCT TCGCCTGCTC CTGGCTTGTT TCAAGCACGA AACGAACACC
TTCTCGCCCG CGCCAACGCC GCTGCAGCGA TTTTTCCGCG ACGGCGACAC CCCACTCGTC
GGTGATGCCG CGGCGGCAGC CCGGCGTGGC ACGGGCACGG GAATGGGCGG CTTCCTTGAA
GTGACCGATC GCGAAGGCTG CGAGATCACG GTGGCCGTGG TCGCCGAAGC GAGCCCGAGC
GGGCTGGTCG ACACCGAAGC CTACGAGCGG ATCGTCGGAC TGATCCTCGA CGCAGCCCGT
GGCAAGGTCT TCGACGGCAT CCTGCTCGAT CTGCATGGGG CAATGGTCAC GCCCGCGCAT
GAAGATGGCG AAGGCGAACT CCTGCGCCGG CTTCGCGAGC TGCAGCCGAC AGTCCCGATC
GGTGCGGCGT TCGACATGCA CGCCAATCTC TATCCCGAGA TGGTCGCGCG CCTGACGGTT
CTCAGCGGCT ACCACACCTA TCCGCACGTC GACATGGCCG CCGCGGGCCG GCGGGCCGCG
GAACTCCTGG TGCGCACGAT TCGTGGAGAA ATTCGTCCCG TGCTCGCGTG GGACAACCGG
CCCATGCTGC CGCACGTCAT GCGCCAGGGC ACGCATGCGC AGCCCAACCG GTCGCTGCAG
GCGCGGTGTA TCGAACTCGA GCAAGCCGGG ACGGTGCTCG CCGCCTCCGT GTTCACCGGC
TTTCCGCATG CGGACATCCG CAACGCCGGC CTGTCGGCCG TGGTGTGCAC GGACGCGAAT
GAAGAACAGG CCAGGCAAGT GCGCGATGAA TTGCTGGATC AGGCCTGGGA GAACCGCTCG
GCCTTCGTGT ACAAGGGACA GCCCCTGGCG AAATCGGTCG CACAGGCCAA GTCGGCCGCC
GGGCGGGTGG TCGTCCTGCT CGATCACTGC GACAACAGCG CGTCCGGTGG CACGATGGAC
ACGACAGGCG TGCTGGCCGA GGTGCTGCGC CAGGACCTTC AGGACGCGGT GTTCTACGCC
ATTCGCGATC CGCAGGCGGT GGAGGAGGCC ATTGCAGCAG GCATCGGCAA CGAAGTCACG
CTGTCGCTCG GTGGCCTGAG CGAGCTGACC ACCACCGGTG ATGCCAACCC GCCGCTCACC
CTTTCGGCGC GCGTTCGCAC CATCAACGAT GGCGCATTCC GGCTGCGCGG TCCCATGATG
GCTGGGGTAG CGATCAGCGC AGGCAAGACC GTCGTGCTTC AGGCCGGCGG CGTCCAGGTC
GTGGTGACTT CCGTGGCGAC CGAGCCGCAT GACCTGGCGT ACCTCATGTC GCTCGGCATC
GATCTGGATC GCGTCAGGTA CCTCGTCTTG AAGAGCCGGG TGCATTGGCG AGCCGGCTTC
GGCAGCCTGG CGGCCGACGT GATCGAATGC GACAGCGTCG GTGTGACGAC GTCGGATTAT
TCGAAGTTGC GCTTCGAGCG CGTGCGGCGT CCGATCTACC CGCTGGATGC ACTGTAA
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| Protein sequence | MNHKAPLRLL LACFKHETNT FSPAPTPLQR FFRDGDTPLV GDAAAAARRG TGTGMGGFLE
VTDREGCEIT VAVVAEASPS GLVDTEAYER IVGLILDAAR GKVFDGILLD LHGAMVTPAH
EDGEGELLRR LRELQPTVPI GAAFDMHANL YPEMVARLTV LSGYHTYPHV DMAAAGRRAA
ELLVRTIRGE IRPVLAWDNR PMLPHVMRQG THAQPNRSLQ ARCIELEQAG TVLAASVFTG
FPHADIRNAG LSAVVCTDAN EEQARQVRDE LLDQAWENRS AFVYKGQPLA KSVAQAKSAA
GRVVVLLDHC DNSASGGTMD TTGVLAEVLR QDLQDAVFYA IRDPQAVEEA IAAGIGNEVT
LSLGGLSELT TTGDANPPLT LSARVRTIND GAFRLRGPMM AGVAISAGKT VVLQAGGVQV
VVTSVATEPH DLAYLMSLGI DLDRVRYLVL KSRVHWRAGF GSLAADVIEC DSVGVTTSDY
SKLRFERVRR PIYPLDAL
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