Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5960 |
Symbol | |
ID | 7974999 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 685824 |
End bp | 686212 |
Gene Length | 389 bp |
Protein Length | |
Translation table | |
GC content | 61% |
IMG OID | 645947796 |
Product | |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0590322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGCCTGGTCA TCAGTTGGTC CATTGGGACG CACCCGGGCG CTGAGCTCGT CAATACATGC TAGATGCGGC CATCGAGACG GTGGTCGATA CCAACGACCA GCCCGTCGCC CATTCCGTTC GTGGCGCCCA CGATCGCTGG CCAAGCTGGC TCTCGCGGAT CGCACATGCG AAGCTCATTC GCTCGATGTC TCGCAAAGGT TGCTCACGTG ACAGCGCGGC GTGCGAAGGC TTCTTCGGAC GGCTGAAGAC GGAGTTGTTC CATCTCCGGA ACTGGAAGAC CACGACCATC GAGCAATTCA TAGAGCTCGT TGATTCCCAC ATCCGCTGGG TACGGCGAGA AGCGATCAAG AACTCCGTGG CCGCCGCAGC CCCATCGGGA CCGAGAGAA
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Protein sequence | |
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