| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5953 |
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| Symbol | |
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| ID | 7974992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 671233 |
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| End bp | 672126 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796517 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947791 |
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| Protein GI | 239820606 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.799703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACCA TTCGTTTTCT TCGCACCTTT GTTGCCGCAG CGCGTGGCGG CTCCTTCGCC
GCGGCTGCCG AACAGGTGGC GCTGACCCAG GCCGCCGTCG GCCAGCAGAT GCGCGCGCTG
GAAGCGGAAA TGAAGAAGAC GCTGTTCGAC AAGACAGGCC GCACGATGGT GCTGAGCCCC
GCGGGCCACC TGCTCCTGCC GCGCGCCGAA GAGTTGCTCG CGCAATACGA ATCGATGCGG
CGCGAACTGC AAGACCAGCG GCAGATCGCG GGGACCATCA AGCTCGGTTC GCTCATCTCG
GCCATGGGGT TGCTGTCGAG CGCGCTCGCG GTGCTCAAGT CGCTGCACCC GAACCTCGAA
GTCGAACTGC GGGTGCGACA GCAATCGCAG CTGATGCAGG ACGTGGCCAG CGGCGAGCTC
GACGCGGCCG TCGTCGTCGA GCGGCAATGG CCCGACACGC CGGGGCTGCT GTGGACGCCT
TGCTATGAAG AGACGCTCAC CGTCATCGCC AATTCGGATA TCGCCAGGCC CGATACCCAC
ATCACCAGCC TGTTCGCCGT CCATCCCTTC ATTCGCTTCG ACCGGCGCAC GCCGACTGGC
GCGCGCATCG ACCGCATCCT GCGGCGGCTG CAGCTGGTCC CCAAGGAGTT CCTGGAGCTC
AATTCATTGC TCGCCATTGC GGAGTTGGTG CGCAAGAACG TGGGTTTCAC CATGGCGCCG
CTGCTCAAGA ACTTCGACTG GGAAAGCGAC CCTGCGCTCT GCGTGCTGCA ACTGCCGGGG
CGGCCCGTCG CGCGGCGCCT GGGGATGCTC GAAAACGGGA AGCGCAGCCA CATCACCGGC
GTGGTCCGTG AGGAAATGCT GGCTCACCTG CGTCGCATGA AGCCTGCTAG TTGA
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| Protein sequence | MSTIRFLRTF VAAARGGSFA AAAEQVALTQ AAVGQQMRAL EAEMKKTLFD KTGRTMVLSP
AGHLLLPRAE ELLAQYESMR RELQDQRQIA GTIKLGSLIS AMGLLSSALA VLKSLHPNLE
VELRVRQQSQ LMQDVASGEL DAAVVVERQW PDTPGLLWTP CYEETLTVIA NSDIARPDTH
ITSLFAVHPF IRFDRRTPTG ARIDRILRRL QLVPKEFLEL NSLLAIAELV RKNVGFTMAP
LLKNFDWESD PALCVLQLPG RPVARRLGML ENGKRSHITG VVREEMLAHL RRMKPAS
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