Gene Vapar_5931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5931 
Symbol 
ID7974970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand- 
Start bp634865 
End bp635437 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content68% 
IMG OID644796496 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002947770 
Protein GI239820585 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCAGCC TGTCCGCGGC GCGCATCGGG GCGCAGGTGC GGGCGCTGCG CATGGCGGCT 
GATGTATCCG GTGGGGCGCT GGCGAAGGCC TCGGGGATTT CGGCCTCGAT GTTGTCACGC 
ATCGAGCGGG GCCTGGTCTC GCCTTCGGTG GAGACCCTGG AGCGTCTCTC GAAAGGTTTG 
GGCGTGTCGG CGCCGCGCTT CTTCGGCGAT CAGGCGCGGC GGACGGACTT CTGCCATGTG 
CGTGCGGGGC GGGGCGTTGT CGTCGATCGG ATCGGTGCGG TCTCCGACTA CCGCTACGAG 
TTGCTGGGCC ACCTGCTGTC GGGCAACCTC TTCGTCGAGC CCTACCTGGT CACGCTGCTG 
CCCGGCGCCG ATCCCTACGT GACCTTCCAG CATCCGGGCC TGAAGTTCCT GTACTTCCTG 
TCCGGGGAAG TCATGTACCG CTACGGTGGC AAGTCGGTGG CGGTGGGGGC GGGGGATTCG 
CTGCTGTTCG AAGCGACCGC GCTGCACGGC ATCGAAGCGA TTCAGAGCGG GCCGGTGTCG 
TACCTGTCGG TGGTTTTCAC GCTGCGCGAG TAG
 
Protein sequence
MRSLSAARIG AQVRALRMAA DVSGGALAKA SGISASMLSR IERGLVSPSV ETLERLSKGL 
GVSAPRFFGD QARRTDFCHV RAGRGVVVDR IGAVSDYRYE LLGHLLSGNL FVEPYLVTLL 
PGADPYVTFQ HPGLKFLYFL SGEVMYRYGG KSVAVGAGDS LLFEATALHG IEAIQSGPVS 
YLSVVFTLRE