| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5776 |
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| Symbol | |
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| ID | 7974897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 480347 |
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| End bp | 481528 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796357 |
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| Product | thiolase |
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| Protein accession | YP_002947631 |
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| Protein GI | 239820446 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGG AACTGAAGGC CTTGCGCGGC AGCGCGGCCA TCGCCGGCGC CGCCACCTTC
GGCTGCGGCG AAGCGCCGGG CTTCACCGAC ATGGAACTGC TGGCGCGCGC CGCGCGCGCG
GCGGTGGCGG ATGCGGGCCT TCAGATGCGC GACATCGACG GCCTCTGCAC CGCCAGCGCC
TCGGCCGCAA TGTGGACGCT GCCGGTGGTC GAATACCTGG GCCTCAATCC GCGCTACATC
GACGGCACCA TGCTGGGCGG CAGCAGCTTC ATCGCGCACC TGCTGCCCGC GATGCAGGCC
ATCCGTTCGG GCCAATGCAG CGCGGTGCTC ATCTGCTACG GCAGCGCGCA GCGCAGTGCC
GCCTTCGGCC GGAGAGAGAT CGTGGCGGCG CGCCGCTTTC TCGACCCGCA GCCCTACGAG
CACCCTTACG AGCCGATGCT GCCGGTGTCG GCCTACGCGC TGGCGGCGTC GCGCCACATG
CACGAATTCG GCACCACGCG CGAGCAGCTG GCCGACGTGG CGGTGGCCGC GCGCGCCTGG
GCCGGGCTCA ACCCCGAAGC CTTCATGCGC GAGCCGCTCA CGCGCGCAGA CGTGCTGGGC
GCCCGCATGG TGTCGGACCC GCTGGGCGTG CGCGACTGCT GCCTGGTCAC CGATGGCGCC
GGCGCCTGCG TGCTGGTGAG CGCCGAGCGC GCGAGGGACC TGCCGAGAAA GCCGGTCTAT
GTGCTGGGCA ACGCCACGGC GGTGTGGAAC CGGCAGATCT CCTCGATGGC GGACCTCACC
GTCACGGCGG CCCGCCAATC GGGCCGCGAG GCCTTCGCGA TGGCCGGGCT CGCACCCGCG
GACATGGACG TGGTGCAGCT GTACGACGCC TTCACCATCA ACACGCTGCT GTTCCTCGAA
GACCTGGGCT TCTGCCCCAA GGGCGAAGGC GGCCGCTTCG TGGCCGACGG CGCCATTGCC
CCCGGCGGCC GGCTGCCCGT GAACACCAAC GGCGGCGGGC TGTCGTGCGT GCATCCCGGC
ATGTACGGCA TCTTCGCGCT CATCGAGACC GTGCGGCAGT TGCGCGGCGA ATGCGGCGAG
CGCCAGGTGA AGAACGCGCA GACCGCGCTC GCGCATGGCA ACGGCGGCAT GCTGTCGAGC
CAGGCCACCG CGATCCTGGG CACGGCCGAA GCGCTGCGTT GA
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| Protein sequence | MSAELKALRG SAAIAGAATF GCGEAPGFTD MELLARAARA AVADAGLQMR DIDGLCTASA
SAAMWTLPVV EYLGLNPRYI DGTMLGGSSF IAHLLPAMQA IRSGQCSAVL ICYGSAQRSA
AFGRREIVAA RRFLDPQPYE HPYEPMLPVS AYALAASRHM HEFGTTREQL ADVAVAARAW
AGLNPEAFMR EPLTRADVLG ARMVSDPLGV RDCCLVTDGA GACVLVSAER ARDLPRKPVY
VLGNATAVWN RQISSMADLT VTAARQSGRE AFAMAGLAPA DMDVVQLYDA FTINTLLFLE
DLGFCPKGEG GRFVADGAIA PGGRLPVNTN GGGLSCVHPG MYGIFALIET VRQLRGECGE
RQVKNAQTAL AHGNGGMLSS QATAILGTAE ALR
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