| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5765 |
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| Symbol | |
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| ID | 7974886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 471026 |
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| End bp | 472006 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796346 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947620 |
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| Protein GI | 239820435 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCA GCTTCCGCCC GCTCAGCCGG CGCGCCGCGC TGGGCGCACT GATCGCCCTC
GGCGCCGGCG CGGCCGCCCC GGCCTTGGCC GCCGAGCCGT ATCCGAGCAA GCCGATCCTG
CTCGTGCTGC CATTTCCGCC GGGCGGCTCC TTCGACCCGA TCTTCCGCAC GCTGGCCGAG
GCCGCCTCCA GGGACCTGGG CCAGCCCATC GTGCTGATGC ACAAGCCGGG CGCCGGCGGC
GTCACCGGCA CCGCATCGCT GGCGACCATG AACGAAGCCG ACGGCTACAC CATCGCGGTC
ATGCACAACT CGGTGATCCG CGCACCGCTG GTGCAGAAGG TGAGCTGGGA TCCGCTCAAG
GACTTCAGCT ACCTGATCGG GCTGGCCGGC CTCGCCACCG GCATCGTGGT GGCCGCCGAT
GCGCCTTGGA AGACGCTGCC CGAGCTGCTG GCCGACGCCA GGAAGCGCCC CGGCGCCGTC
AGCTGGGGCA ACGTCGGCGC GATCAGCATC AACCGCATCT ACGCCGAGCG GCTCGCCAGG
CAGGCGGGCA CCTCCTTCAA CCTGGTGCCC TACAAGGGCG GCAGCGAGGC CTTCCAGGCG
GTGATCGGCC GCCACCTCGA CGTCTACGGC GATCCCGGCT TCGGGCCCCA GGTGCAGGGC
GGCAAGGTGC GCCTGCTCGC CACCTTCACC GCCGAGCGCC TGAAGCGCTA CGACGCGCCG
ACCGTCAAGG AGCTGGGCCA CGACATGGTG ATCGAGTCGC CGGTGGGCCT GGTCGCGCCG
AAGAACCTTG ATCCGAAGAT TGCCGCCAGG CTGCACACGG CCTTCAGCAA GGCCGCGGCG
GACCCGGCCT ACCTCCAGCA GCTGGATCTG TTCGACATGC AGCCCAAGCT GATGACCGGC
GAGGGCTATG CCGGCTACGC CCGTGCGCAG TTCGAGCGCG AACGCAAGAT GCTGGCCGAG
ATCGGCTTCA AGCCGGAGTG A
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| Protein sequence | MNRSFRPLSR RAALGALIAL GAGAAAPALA AEPYPSKPIL LVLPFPPGGS FDPIFRTLAE
AASRDLGQPI VLMHKPGAGG VTGTASLATM NEADGYTIAV MHNSVIRAPL VQKVSWDPLK
DFSYLIGLAG LATGIVVAAD APWKTLPELL ADARKRPGAV SWGNVGAISI NRIYAERLAR
QAGTSFNLVP YKGGSEAFQA VIGRHLDVYG DPGFGPQVQG GKVRLLATFT AERLKRYDAP
TVKELGHDMV IESPVGLVAP KNLDPKIAAR LHTAFSKAAA DPAYLQQLDL FDMQPKLMTG
EGYAGYARAQ FERERKMLAE IGFKPE
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