| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5663 |
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| Symbol | |
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| ID | 7975716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 370213 |
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| End bp | 371214 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796246 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947520 |
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| Protein GI | 239820335 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGA CCGATCCCCT TTCCGAAGCG TTGGGCAACG TGCGCCTGAG CGGCGCGATC
TTTCTTGACG CCGAGCTGAG CGCGCCCTGG GGCTTTGCGT CGCCGCCGGC CAGTGCGGGC
GCGCACCTCA TCGCGCCTTC GGCGGAACAC ATGGTGCTGT TTCACCTGCT TGTCGAAGGC
AGGGCCTCCG TGCGGCTTCC GGGGCAGCCC CGGTTGGCGC TCGAGGCGGG CGACGTTGCC
ATCCTCCCGC TGGGAGACGC GCATGAGCTC TGGAACGGGC GCGGGGCCGA GCTCACCGAC
TCGTCCGCGC TGCTGCCGAA GATCCTGGAG GGAGCGGTGG TCTCGGAGCG CGGCGGCGGC
GGCGGGCCCG TCACCAAGTT CATCTGCGGC TATATCGGCT GCGATCGCCA GGCCAGGCGC
TTCTTCCTGG CGGGCTTGCC GCCGCTGTTC AAGGTGAACA TCCGCCGCGG GTCGACGGGC
GCGTGGATCG AAAGCACGCT CCGCCACCTC GCCTCCGATC GCGAGCCGGC CGGCGCCGGG
CGCAACGCGC TGCTCGCCAA GCTGGCCGAG GCGCTCTTCA TCGAGACGCT GCGCCGCTAC
ATGTCCGAGC TGCCGCGGCA GCGGACCGGA TGGCTCGCGG CCGCACGCGA TTCGGCGGTG
GGCCGGGCCC TGGGCGCGAT CCATCGCGAG CCCGCGCACC CGTGGACGGT CGCGTCGCTG
GCCGAACAGG CCGGGATGTC GCGCACCGTG TTTGCGGAAC GGTTCACCCG TCTGCTGGGC
GAGGCGCCGC TGGGCTATGT CGCGCGCTGC CGCATGCAGC TCGGCGCCCG CCTGCTCGAG
AGCACCGATG ACACGGTGCT CGAAGTCGCG CTGAACGCGG GCTACGAGTC CGAGGCCGCC
TTCAACCGTG CGTTCAAGCG CGAGTTCGAT GTTCCGCCTG CGCGCTATCG GATGCAGCGG
CGCAGGGGAG ACCGGATGGC GGCGGACAGC GGCGCGCAAT GA
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| Protein sequence | MNQTDPLSEA LGNVRLSGAI FLDAELSAPW GFASPPASAG AHLIAPSAEH MVLFHLLVEG
RASVRLPGQP RLALEAGDVA ILPLGDAHEL WNGRGAELTD SSALLPKILE GAVVSERGGG
GGPVTKFICG YIGCDRQARR FFLAGLPPLF KVNIRRGSTG AWIESTLRHL ASDREPAGAG
RNALLAKLAE ALFIETLRRY MSELPRQRTG WLAAARDSAV GRALGAIHRE PAHPWTVASL
AEQAGMSRTV FAERFTRLLG EAPLGYVARC RMQLGARLLE STDDTVLEVA LNAGYESEAA
FNRAFKREFD VPPARYRMQR RRGDRMAADS GAQ
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