| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5654 |
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| Symbol | |
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| ID | 7975699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 359940 |
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| End bp | 360866 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644796238 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947512 |
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| Protein GI | 239820327 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.127285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCGC AGGGCAGCAG CGGCGCATGG GCGCAGGCAG GCGACGCGCG CCCCCTCAAG
CTGGTCGTGC CCTTCGCGGC CGGCACCACG ACCGACATCG TGGGACGGGT GCTGGCCGAA
GCCCTCGGGC GCCAGCTGTC GCAGGCGGTG ATCGTCGACA ACCGGCCCGG TGCGGGCGGC
GCCATCGGCA GCGAACTGGT GGCCCGCTCG GGGGCGGATG CGCACACCGT GCTGCTGGGC
ACCGTCGGCA CGCATGCCAT CAACGCGACG CTCTACAAGC GCCTGTCCTA CCAGCCGCAG
CGCGACTTCG TGCCGCTGGG CTTCGTCGGC GCCACGCCCA CGCTGCTGGT GGTGGCCGCG
GCCGCGCCGT GGAAGACGGT GTCGGACCTG CGCCAGGCCA GCGGCAAGTC GGTGAGCTTT
GCCTCGGCCG GCAACGGCAC CTCGGGGCAC CTGGCGGGCG AACTGCTCAA CCTGCGGCTC
GGCAAGGACT TCGTGCACGT GCCCTACCGC GACGGCGCCC AGGCGCTCAC CGAGGTGATG
GCGGGCAATG TGCAGTTCAT GTTCTATCAC CCGGCCGCCG TGCTGCCGCA GATCCGCGCC
GGCAGGCTGC GCGCGCTGGG TGCATCGAGC GCCCGGCGAA GCATGGCCGC GCCCGACGTG
CCCACGCTGG CCGAGCAGGG CATTCCGGAT TTCGACCTGG TCGCATGGTT CATGTTGTAT
GCGCCGGCCG ACATGCCCGC CGCGCAGCGC GACCGCCTGC GCGAGGCCAC GCAGGCGGTG
CTCGCGCAGC CCGCGGTGCG CGACAAGCTC GCGGCCCAGG GCATCGAGCC GATGGCGATG
AACGCATCGG ACATGGCCGC CTTCGCCGCG GCCGAGATCG CGAAGTGGGG CGAGGCCGTG
CGCCGCTCCG GCGCGCAGGT GGATTGA
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| Protein sequence | MLAQGSSGAW AQAGDARPLK LVVPFAAGTT TDIVGRVLAE ALGRQLSQAV IVDNRPGAGG
AIGSELVARS GADAHTVLLG TVGTHAINAT LYKRLSYQPQ RDFVPLGFVG ATPTLLVVAA
AAPWKTVSDL RQASGKSVSF ASAGNGTSGH LAGELLNLRL GKDFVHVPYR DGAQALTEVM
AGNVQFMFYH PAAVLPQIRA GRLRALGASS ARRSMAAPDV PTLAEQGIPD FDLVAWFMLY
APADMPAAQR DRLREATQAV LAQPAVRDKL AAQGIEPMAM NASDMAAFAA AEIAKWGEAV
RRSGAQVD
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