| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5627 |
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| Symbol | |
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| ID | 7975239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 332154 |
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| End bp | 332924 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796211 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947485 |
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| Protein GI | 239820300 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGC GCTTGCTGCC AACCACCCTC GCCCTCGCAG ACCAGGTGCG GAATTTCGTG
ATCGTCGAAA CCGCCGAGGC CGCCACTCGC CTGCTCATGC CGGAGCCAAG CATCCTGCTT
GGCATTCGTT ACGGCGGCTA TGCCGAGCAA CTGGATGGGC CGAAGACACG CCGCCTGCCC
CAGACCACGC TGACGGGACT GCGCGACACC GCACGTTCGA TGCACACCTC GGCCGGCGGT
GGCATCGTGC TTGCTGCTTT CCGTCCTGCG GGCGCTGCGC AGTTCTTCGA CCTGCCCGCA
GAAGGCCTGT TCGGCACCAC GATCGATCTT GCCTCCCTGG TGGCGGATGC CGACCTGGCA
GGTCTTTGCT CGGCCATGAC TGCGGCCGGG GACGATCTGC AGCGCGTGAA TTGCCTGGAG
CGCTTTCTTC TCGCCCGACG AAGGCGGCCC GCCGACACGT TGGTGAGCGA GGCCCTGCGA
GCCATCGAGA AGAGCGTCGG AACGATCCGC ATCGCAGCGC TTGCGTCGGA TCTGGGCGTC
AGCGTCGACT GGCTGGCAAA ACGATTCCGC CGTACTGTCG GAGCGACACC AAAGCAACTC
GCCTCCATCA TCCGCATGCG CCATGCGTTG TCGCTGTACG GCGAGGCATC CAGCCTCACA
CAGCTGTCTG TCCAGGCTGG CTATGCCGAC CAGTCGCACT TTATCCGCGA GTTCCGTTCC
GTGACCGGCC AGGCGCCTCG GCGCCTGCTG AAAGGCGGCG AGTACTGCTG A
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| Protein sequence | MRMRLLPTTL ALADQVRNFV IVETAEAATR LLMPEPSILL GIRYGGYAEQ LDGPKTRRLP
QTTLTGLRDT ARSMHTSAGG GIVLAAFRPA GAAQFFDLPA EGLFGTTIDL ASLVADADLA
GLCSAMTAAG DDLQRVNCLE RFLLARRRRP ADTLVSEALR AIEKSVGTIR IAALASDLGV
SVDWLAKRFR RTVGATPKQL ASIIRMRHAL SLYGEASSLT QLSVQAGYAD QSHFIREFRS
VTGQAPRRLL KGGEYC
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