| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5591 |
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| Symbol | |
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| ID | 7975203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 299377 |
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| End bp | 300171 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796175 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002947449 |
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| Protein GI | 239820264 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.787877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATACG CCGAATCGCA GGGGGCGCCC CGCTCGCGCT CCCGTCTGGG CATGGCCCTG
ATGGTGGTGC TCGCGCTGGC CGGTGCCTGG GCGCTGGTCA AGCACTTCGC CGGCGCCAGC
GCGGCCTCCG CGGGCTACGA CTGGGACTTC GCGGTGCTGT GGAAGTACCG CTCGCTGCTC
ATCAGCGGGC TGCTCTACAC GCTGCTGTTC ACGGTGGTCT GCGTGGTGCT CGGGCTGCTG
GTGGGCGTGG TCACCGGCCT GGGGCGCCTG TCCACCAACC CGTACATCAC GGCGCCGCTG
CGCGCCTACA TCGAGGTGTT CCGGTGCACG CCGGTGCTGG TGCAGCTCGT GTGGTTCTAC
TACGCGCTGC CCGTGCTCAC CGGCCTCGAA CTCTCGGCCA CGGCCGCCGC CACGCTGTGC
CTGACGCTCT ACGGCGGCGC GTTCTATTCG GAGATCGTGC GCGGCGGGAT CATCTCCATC
GAGGCCGGCC AGACCGAGGC CGGCAAGGCG CTGGGCATGA CGCGCCTGCA GCTGCTGCGC
CGCATCCTGC TGCCGCAGGC GTTCAAGAAA ATGGTGCCGC CGCTGATGAG CCAGTCGATC
ATGCAGCTGA AGAACACCTC GCTGCTCTCG GTGCTGGCCG TGCCGGACCT GCTGTACCAG
GGCCAGGTGA TCGCGCACGA CACCTACCGG CCGCTGGAGC TCTACACCTT CATCGCCATT
GCCTATTTCG CCGTGCTGCT GCCCATCACG ATCTGGGCCA AGCGCATGGA ATACGGCGTT
GCCAAGGAAG CCTGA
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| Protein sequence | MEYAESQGAP RSRSRLGMAL MVVLALAGAW ALVKHFAGAS AASAGYDWDF AVLWKYRSLL
ISGLLYTLLF TVVCVVLGLL VGVVTGLGRL STNPYITAPL RAYIEVFRCT PVLVQLVWFY
YALPVLTGLE LSATAAATLC LTLYGGAFYS EIVRGGIISI EAGQTEAGKA LGMTRLQLLR
RILLPQAFKK MVPPLMSQSI MQLKNTSLLS VLAVPDLLYQ GQVIAHDTYR PLELYTFIAI
AYFAVLLPIT IWAKRMEYGV AKEA
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