Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5568 |
Symbol | |
ID | 7975425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 277068 |
End bp | 277502 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644796152 |
Product | protein of unknown function DUF395 YeeE/YedE |
Protein accession | YP_002947426 |
Protein GI | 239820241 |
COG category | [R] General function prediction only |
COG ID | [COG2391] Predicted transporter component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.127234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATCG ACTGGCCTGC ATTCACTCCA TGGACCGCCC TGGCGGGCGG CGTGCTCGTT GGCGCGGCCG CCGCGATGTT CGTGCTGCTC AACGGCCGCA TCGCCGGCAT CAGCGGCATC GTCGGCGGGC TGCTGCGGCC CGTGCGGGGC GACGTGGCCT GGCGCCTGGC GTTCGTGGCC GGGCTGGTCG CGGCGCCCAT GGCCTATGCG GCTTTCGCGC CGTGGCCCCG GCCGCAGATC GATGCCGGCT ACGTTGCGCT CGTTGCGGCC GGCCTGCTGG TCGGCGTGGG CACGCGCTAC GCGTCGGGGT GCACGAGCGG CCACGGCGTG TGCGGCCTCT CGCGGCTGTC GCCGCGCTCG CTGGCGGCGA CCGCGGTCTT CATGGGTGCC GGCTTCCTGG CCGTGTTCCT GATGCGCCAT CTGCTCGGTC TTTGA
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Protein sequence | MTIDWPAFTP WTALAGGVLV GAAAAMFVLL NGRIAGISGI VGGLLRPVRG DVAWRLAFVA GLVAAPMAYA AFAPWPRPQI DAGYVALVAA GLLVGVGTRY ASGCTSGHGV CGLSRLSPRS LAATAVFMGA GFLAVFLMRH LLGL
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