Gene Vapar_5567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5567 
Symbol 
ID7975424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp276736 
End bp277065 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID644796151 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_002947425 
Protein GI239820240 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.119267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCAA GAAAGCGCCA CCCCGTCTTC GATCCCGAGA TCCTGCGCGG CGCCGCTGCG 
CGCGCGGTCG GCATGCTGAA GGTATTGGCC AACGAGGACC GCATGCTGCT GCTGTGCCAG
CTGTCCCAGG GCGAGATGTG CGTGAGCGAG CTCGAAGCGC AGCTCGACAT CCGCCAGCCG
ACGCTGTCCC AGCAGTTGGG CGTGCTGCGC AACGAGGGCG TGGTCACCAC GCGCCGCCAG
GGCAAGAACG TCTTCTACGC CGTGGCAGAC CCGTCGCTGC TCGAGATCCT CGCCCTGCTC
TACCGGATCT ACTGCCCGAA GGAAGAATGA
 
Protein sequence
MKSRKRHPVF DPEILRGAAA RAVGMLKVLA NEDRMLLLCQ LSQGEMCVSE LEAQLDIRQP 
TLSQQLGVLR NEGVVTTRRQ GKNVFYAVAD PSLLEILALL YRIYCPKEE