Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5567 |
Symbol | |
ID | 7975424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 276736 |
End bp | 277065 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644796151 |
Product | transcriptional regulator, ArsR family |
Protein accession | YP_002947425 |
Protein GI | 239820240 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.119267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCAA GAAAGCGCCA CCCCGTCTTC GATCCCGAGA TCCTGCGCGG CGCCGCTGCG CGCGCGGTCG GCATGCTGAA GGTATTGGCC AACGAGGACC GCATGCTGCT GCTGTGCCAG CTGTCCCAGG GCGAGATGTG CGTGAGCGAG CTCGAAGCGC AGCTCGACAT CCGCCAGCCG ACGCTGTCCC AGCAGTTGGG CGTGCTGCGC AACGAGGGCG TGGTCACCAC GCGCCGCCAG GGCAAGAACG TCTTCTACGC CGTGGCAGAC CCGTCGCTGC TCGAGATCCT CGCCCTGCTC TACCGGATCT ACTGCCCGAA GGAAGAATGA
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Protein sequence | MKSRKRHPVF DPEILRGAAA RAVGMLKVLA NEDRMLLLCQ LSQGEMCVSE LEAQLDIRQP TLSQQLGVLR NEGVVTTRRQ GKNVFYAVAD PSLLEILALL YRIYCPKEE
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