| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5542 |
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| Symbol | |
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| ID | 7975399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 245223 |
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| End bp | 247283 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796127 |
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| Product | elongation factor G |
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| Protein accession | YP_002947401 |
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| Protein GI | 239820216 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGCC GATCGAACGG CCTTGCGGCC GAAATGCAGG CCGTGCGAAC GCTGGCGCTG
GTGGGTGCCG CAGCCGCCGG CAAAAGCTCG CTGGCCGAGA ACCTGCTGCA CAAGGCCGGC
GCCATCGCAG CCTGCGGCAG CATCGAGCGC GGCAGCACCG TCAGCGATCA CGACCCGCTC
GAGCGCCGCA TGCAGCACTC GCTCAACGCA TCGGTGATGC ACCTCACGCA CGGCGGCACG
CGCATCCACC TGATCGACAC GCCCGGCGGG CCCGATTTCC TCGGCCAGAG CCTGCCGGCG
CTGGAGGCGG TCGAGACGGC GGCGGTGGTC ATCAATGCCG CGACCGGCAT CGAGCCGATG
ACGGTGCGCA TGATGGAGTA CGCGGCCTCG CGCCACCTGG CGCGCATGAT CATCGTCAAC
AAGATCGACT CGCAGGGTGT TTCGCTGGCG GGCCTGCTGG CGGACATCCA GGCCACCTTC
GGCCGCGAAT GCCTGCCGCT GAACCTGCCC GACGGGGTCG GCCGTCAGGT GGTGGACTGC
TTCTTCAACC GCTTCGGGCA GTCCGACTTC GGCCCGGTCG AGGCGGCGCA CCGCGCGCTG
GTGGAGCAGG TGGTCGAGGT CGACGCGGCC TTCGTCGACC GCTACCTCGA GGAGGGCGAC
GTGGATCCGG CCGAGCTGCA CGCGCCGCTC GAACAGGCAC TGCGCGAAGG CCACCTGATC
CCGGTGTGCT TCGTCTCGTC GCGCAGCGGC GCCGGCGTGG CCGAACTGCT GGACGTGATC
GTCAAGCTGC TGCCCGATCC GACCGAAGCC AACCCGCCGG ACTTCATCGT TGGCGAGGGT
GCAGAGGCCA GGCCCATGGA GGCCAGCCCC GACCCGTCGC TGCACGTGCT GGCGCATGTG
TTCAAGGTCA CGGTCGACCC CTATGTCGGC AAGCTGGGCA TCTTCCGCGT GCACCAGGGC
ACGGTCACCC GCGACAGCCA GCTCTACATC GGCGACGGAC GCAAGCCCTT CAAGGTGGGG
CACCTGTTCA TGCTCCAGGG CAAGGATCAC GTCGAGGTGT CGCATGCGGT GCCGGGCGAC
ATCGTGGCGG TGGCCAAGGT CGAGGAGATC CATTTCGATG CCGTGCTGCA CGACGCGGCG
GAAGACGCCC ACGTGCACCT CGCGCCGCTG CCGTTTCCGG TGCCGGTGCA CGGCCTGGCC
GTGGAGCCCA AGCGACATGG CGACGAGCAG CGCGCCTGGG AGATCCTCGG CAAGCTCGCG
GCCGAGGACC CGTGCCTGCG CATCGAGCAC GTGGCCGCGA CCAACGAGAC GGTGCTCTAC
GGGCTTGGCG AGTTGCACCT GCGCATCGTG CTCGAGCGCC TGCGCGAGGT GTACCGCTTC
GAGGTCCAGA CGCGGCCGCC GCGCATCGCC TACCGCGAGA CCGTGAGCGC GCCGGCCGAG
GGCCACCACC GCCACAAGAA GCAGACCGGC GGCGCCGGCC AGTTTGCCGA GGTCTTCCTG
CGCATCGAGC CGCTCGCGCG CGGCGCGGGT TTCCAGTTTG GGGACGAGGT CAGGGGCGGC
GCGATCCCGG GCCAGTTCAT TCCCGCGGTG GAGAAGGGCG TGCGCGAGGT GCTGGCGTAC
GGCGCAATCG CAGGCTACCC CGTGGTCGAC GTGCGCGTGG TGGTGTACGA CGGCAAGCAC
CACAGCGTCG ACAGCAAGGA CATCGCCTTT GCGACCGCCG GCCGCAAGGC CTTCATGGCC
GCGATCCGCG AGGCCCGGCC GGTGGTGCTC GAGCCGATCG TGCAGATCGA GATCGCCGTG
CCCGAGCATG CCGTGGGCGA CGTCACGAGC GACCTGTCGG CTCGGCGCGG CCTGGTCACC
GGCACCTCGG GCCTGGGAGG CGGCACCGTG GCCATCGGCG GGCAGGTGCC CGAGGCCGAG
CTCGCCAGCT ATCAGTCGCG GCTCAATGCA ATGACCAGCG GCCAGGGCCG CTACACCATC
GCGCTGTCGC ACTACGAAGC GGTGCCGCCG GCGGTCCAGC AGGCGCTGGT GAGCCAATAC
CAGGTGCGTG ACGAGGAATA G
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| Protein sequence | MPSRSNGLAA EMQAVRTLAL VGAAAAGKSS LAENLLHKAG AIAACGSIER GSTVSDHDPL
ERRMQHSLNA SVMHLTHGGT RIHLIDTPGG PDFLGQSLPA LEAVETAAVV INAATGIEPM
TVRMMEYAAS RHLARMIIVN KIDSQGVSLA GLLADIQATF GRECLPLNLP DGVGRQVVDC
FFNRFGQSDF GPVEAAHRAL VEQVVEVDAA FVDRYLEEGD VDPAELHAPL EQALREGHLI
PVCFVSSRSG AGVAELLDVI VKLLPDPTEA NPPDFIVGEG AEARPMEASP DPSLHVLAHV
FKVTVDPYVG KLGIFRVHQG TVTRDSQLYI GDGRKPFKVG HLFMLQGKDH VEVSHAVPGD
IVAVAKVEEI HFDAVLHDAA EDAHVHLAPL PFPVPVHGLA VEPKRHGDEQ RAWEILGKLA
AEDPCLRIEH VAATNETVLY GLGELHLRIV LERLREVYRF EVQTRPPRIA YRETVSAPAE
GHHRHKKQTG GAGQFAEVFL RIEPLARGAG FQFGDEVRGG AIPGQFIPAV EKGVREVLAY
GAIAGYPVVD VRVVVYDGKH HSVDSKDIAF ATAGRKAFMA AIREARPVVL EPIVQIEIAV
PEHAVGDVTS DLSARRGLVT GTSGLGGGTV AIGGQVPEAE LASYQSRLNA MTSGQGRYTI
ALSHYEAVPP AVQQALVSQY QVRDEE
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