Gene Vapar_5485 details

Gene Information

• Locus tag: Vapar_5485
• ID: 7975179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 188474
• End bp: 188932
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644796072
• Product: (2Fe-2S)-binding domain protein
• Protein accession: YP_002947346
• Protein GI: 239820161
• COG category: [C] Energy production and conversion
• COG ID: [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGTGC AATCTTTCAA GGTGAACGGC GGCAACGTCG ACGTCGAGGC GCCCGACGAC 
ATGGCCCTGC TCTGGGTGCT GCGCGACAAG CTCGGCATCA CCGGCCCGAA GTACGGCTGC 
GGCATCAACG TGTGCAAGGC CTGTACCTGC CACGTGGACG GCAAGGCGGT CACCACCTGC 
TCCACGCGGG TGGCCGACGT GCGCGGCCGG CAGGTCACGA CCATCGAGGG CCTGGCCAAC 
GGCAACGTGC TGCATCCGGT GCAGCAGGCC TGGATGAACC TCGACGTGCC GCAATGCGGC 
TTCTGCCAGC CGGGCCAGAT CATGGCGGCG GTCGACCTGC TGCGGCGCAC CCGCAACCCG 
ACCGACGCGG ACATCGACGC CATCGAGAAC GTGTGCCGCT GCGGCACCTA CGGCCGCGTG 
CGCGAAGCGA TCAAGGCGGC CGCGGCGATG ATGGGTTAG 

 

Protein sequence

MPVQSFKVNG GNVDVEAPDD MALLWVLRDK LGITGPKYGC GINVCKACTC HVDGKAVTTC 
STRVADVRGR QVTTIEGLAN GNVLHPVQQA WMNLDVPQCG FCQPGQIMAA VDLLRRTRNP 
TDADIDAIEN VCRCGTYGRV REAIKAAAAM MG