| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5460 |
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| Symbol | |
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| ID | 7975154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 161424 |
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| End bp | 162776 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796048 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002947322 |
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| Protein GI | 239820137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCA CCGCAGCGGC AGCACCCGTT CGGCTTTCCG CCGCCCCGTC CGAACTGGAC
GGGGTCTACC GCAAGATCAT CTGGCGGCTC ATCCCCTTCC TGATGCTGCT GTGGGTGCTG
GCCTGGATCG ACCGGGTCAA CATCGGGTTC ATCAAGCTGA CCATGCTCGA CGAGCTCCAA
TGGAACGAGG CGATGTACGG CCTGGGCGCG GGCATCTTCT TCCTGGGCTA CTTCTTCTTC
GAGGTGCCCA GCAACCTGCT GCTGCAGCGC ATCGGGGCCA AGAAGACCAT CATGCGCATC
ACGATCGGCT GGGGCCTGAC CTCGATCGCC ACGATGTTCG TGAAGACGCC GGAGATGTTC
TATTTCCTGC GCTTCGTGCT GGGGGTGTTC GAGGCCGGCT TCTACCCCGG CATCATCCTC
TACCTGACCT ACTGGTTCCC CAATGACCGG CGCGCCAAGG CCTTCGGCAT GTTCATGTCG
GCCTCGGCCT TCGCTGGCGT GATCGGCGGC CCGATGGCCG GCACCATCAT GACCGGCATG
CACGGCCTGA ACGGCTGGTC GGGCTGGCAG TGGGTGCTGC TGCTGGAGGG CATTCCCTCG
GTCGTCGCGG GCTTCGTCAC CTATTTCTAC CTGACCGACC GGCCCGAGCA GGCCCATTGG
CTCACGGCAC GCGAGCGCCA GTTGGTGCAT GAAGACCTGG AGCGCGACGG CCGCTCGCTG
GGCCAGCGCG AACACGGCAT GCTGGCCTCG CTCAGGAGCG GGCGCATCTG GCTCCTGATC
CTGATCTTCT TCTGCATCAT CGCGGCCAAT TCCTCGCTGA CCTTCTACGG CCCCACGCTG
GTCAAGGAAG TGGGTTTCAC CAGCCCGGTG GCGGTGGGCT GGATCATGGC CGTGGCCTAC
CTGTGCGGCG CCGCCGGCAT GATCTGGAAC GGCTTCCACT CCGACAAGCA GCAGGAATCG
CGCTGGCACT GCGGCCTGGC CGCTGCGCTG GGCGCGGTGT CGCTGCTGGG CGTCGCGCTC
TTCCTGGGGC ACAGTGCGCT GGCGGTGCTG GTGGGCCTCA CCTTGGCCAT TGTCGGCACC
ATGAGCGCCA TCCCGGTGTT CTGGCAGATG CCCAACCGCT TCCTGGCCGG CACCGCGGCG
GCCGGCGGCG TGGCGCTGAT CAACTCCATC GCCAACCTGG CCGGCTTCGG CGCACCCTGG
ATGCTGGGCC TGATCAAGAC CTCCACGGGC AGCCTCTCGT CAGGCCTCTA CGTGGTGGCG
GCAATCGAGA TCTGCGCCAC CTTGCTGATC CTGGCCTGCG TGCCCGCCTA CCGCAAGCAG
CCGGCCGCCG CAGCAGCCGC CCCCGCACGT TGA
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| Protein sequence | MTSTAAAAPV RLSAAPSELD GVYRKIIWRL IPFLMLLWVL AWIDRVNIGF IKLTMLDELQ
WNEAMYGLGA GIFFLGYFFF EVPSNLLLQR IGAKKTIMRI TIGWGLTSIA TMFVKTPEMF
YFLRFVLGVF EAGFYPGIIL YLTYWFPNDR RAKAFGMFMS ASAFAGVIGG PMAGTIMTGM
HGLNGWSGWQ WVLLLEGIPS VVAGFVTYFY LTDRPEQAHW LTARERQLVH EDLERDGRSL
GQREHGMLAS LRSGRIWLLI LIFFCIIAAN SSLTFYGPTL VKEVGFTSPV AVGWIMAVAY
LCGAAGMIWN GFHSDKQQES RWHCGLAAAL GAVSLLGVAL FLGHSALAVL VGLTLAIVGT
MSAIPVFWQM PNRFLAGTAA AGGVALINSI ANLAGFGAPW MLGLIKTSTG SLSSGLYVVA
AIEICATLLI LACVPAYRKQ PAAAAAAPAR
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