| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5438 |
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| Symbol | |
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| ID | 7975132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 140769 |
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| End bp | 141314 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796026 |
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| Product | OsmC family protein |
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| Protein accession | YP_002947300 |
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| Protein GI | 239820115 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
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| TIGRFAM ID | [TIGR03561] peroxiredoxin, Ohr subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCACGC CGAAAGATAC AGTCCCAGTT TCTGCAGCAC AGGCCGTGCA ATCCAGCCCG
CTGCAACCGC CTCCCGTCAC GCTGCTCGAC AAGTACAAGG GGCAGGAATT CGAGCCGATC
TATTCGACCG TCGTCACGGT GAGCGGCGGC GAAGCGGAGC ACGGACGGGC CTCGGGCGTG
GCGCGCTCCG ACGACGGCAA CCTGAACCTG GAGCTTCGGC TTCCGGCCGC GCTGGGAGGC
GGCGGCGGCG GCACCAACCC GGAGCAGCTG TTCGCGGCAG CCTATGCCGC GTGCTTCCAT
GGGGCGTTGA ACCTGCTGGC CGCGAAGAAG AAGATTCCGG TTCATGACGC CACCGTGGAG
GCGTCCGTCG TTTTCGGGCG CGACCCCGTC GACGGACTCT TCGTGCTCAC CGCCGATGTG
CGGATCCATT TGCCCGACGT CGAGAAAAGC GTGGCCGAAG AACTGGTGCG CAGCACGGAA
AGATTTTGTC CCTATGCGAA GATGGCCCGC AACGGCATCA CGAGCATCGT TGCACTGGCC
GCCTAG
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| Protein sequence | MPTPKDTVPV SAAQAVQSSP LQPPPVTLLD KYKGQEFEPI YSTVVTVSGG EAEHGRASGV
ARSDDGNLNL ELRLPAALGG GGGGTNPEQL FAAAYAACFH GALNLLAAKK KIPVHDATVE
ASVVFGRDPV DGLFVLTADV RIHLPDVEKS VAEELVRSTE RFCPYAKMAR NGITSIVALA
A
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