Gene Vapar_5433 details

Gene Information

• Locus tag: Vapar_5433
• ID: 7975127
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 137484
• End bp: 138110
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644796021
• Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
• Protein accession: YP_002947295
• Protein GI: 239820110
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGACCA CAAGCTCGTC TGACAGCGCC GCCGATGCGG TGTTCGACGC CACGGGCATC 
GCCGCCCGTG CCAAGCGCGC CGGCGACCTT GCGCCCGACG CGACCCTGCC GGACGGTGCC 
GGCCGCCTGG TCCGACTGTC GGACGAATGG CGCAAGGGCC CGCTCGTGCT GGTGTTCTAC 
CGCGGCGGCT GGTGCGGCTA CTGCAGCCTC CAGCTGCGGG CCTGGCACCA GCGGGCGGAC 
GACCTGGCGC GGCTCGGCGC CACGCTCCTG GCGATCTCGC CGCAGACGCC CGACCATTCG 
ATGCGTACGG CCGAGGACAA CCAGTTCACG TTCACCGTGC TCAGCGATTC CAACCTCGAA 
GCCGCCAGCG GCTTCGAGCT GGCCTTCACG CTCCCGCCCG AGCTCGTCAG CTTCTACGGC 
TCGGTGGGCA CCGACATTCC CGTCCTGAAC GGCAACGGCC TGTGGGTGTT GCCGGTTCCG 
GCGACCTATG TGATCGATGA GGATGGCCGC ATCCGTTTCG CCCACATCGA GGAGGACATC 
CGGAAGCGCG CAGAGCCGGC CGATGTGCTG CGCGCAATCG AAGACATGGT CCGCGGCCGC 
GCCCTTGCGG CAGCCAGTGC CCCCTGA 

 

Protein sequence

MSTTSSSDSA ADAVFDATGI AARAKRAGDL APDATLPDGA GRLVRLSDEW RKGPLVLVFY 
RGGWCGYCSL QLRAWHQRAD DLARLGATLL AISPQTPDHS MRTAEDNQFT FTVLSDSNLE 
AASGFELAFT LPPELVSFYG SVGTDIPVLN GNGLWVLPVP ATYVIDEDGR IRFAHIEEDI 
RKRAEPADVL RAIEDMVRGR ALAAASAP