Gene Vapar_5424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5424 
Symbol 
ID7975118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp130352 
End bp130957 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID644796012 
Producthypothetical protein 
Protein accessionYP_002947286 
Protein GI239820101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATC GAACTTTCCG CCTCGACCTC CGGCTGCCGC AACTGCGCCG CAAGCGACAT 
GGCGCGGCCC TGGTCCTTCT CGGCATCGGC GCCTGCATTT CGCAGGTGGC GCGCGCCGAC 
ACGCCGTTGC ACCCACCCTC CTCTTTCTTC ACCCAGTTCG GCTCGGCGCA CGGGACCCGC 
ACGCTGACCG CGGGGCTGAC CTGGGACCTG CCCTACCGAT GGCAGCTGGG CCCGGGCGAG 
CTCCGCAGCT ATCTGGAAGC CTCCTACGCG TACTGGCAGA TCCAGTCGAC GGACCGGGCA 
GGGCTTTCGC ACCTGTCGCA GTTCGCGTTG ATTCCCGTGC TGCGCTATCG CCCCGCGGAT 
GGCGCTTCGC CGTGGTTCTT CGAAACCGGG GTGGGGGTGA CCGCCAGCTC GTCGGTCTAC 
AGGACCCGGC AGAAGAGCTT TTCGACGAGC TTCAACTTCA GCACCCACCT GGCGGTCGGC 
CGCAGCTTCG GCGCGCAACG GCAGCACGAG ATCGCGTTGC GCCTCGAGCA TTTCTCGAAC 
GCCGGCATCA AGCACCCGAA CCCCGGCGAG AACTTCATTC AGCTGCGGTA CGCGCGCAGG 
TTCTAG
 
Protein sequence
MSDRTFRLDL RLPQLRRKRH GAALVLLGIG ACISQVARAD TPLHPPSSFF TQFGSAHGTR 
TLTAGLTWDL PYRWQLGPGE LRSYLEASYA YWQIQSTDRA GLSHLSQFAL IPVLRYRPAD 
GASPWFFETG VGVTASSSVY RTRQKSFSTS FNFSTHLAVG RSFGAQRQHE IALRLEHFSN 
AGIKHPNPGE NFIQLRYARR F