Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5416 |
Symbol | |
ID | 7975110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 122437 |
End bp | 123324 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644796004 |
Product | tryptophan 23-dioxygenase |
Protein accession | YP_002947278 |
Protein GI | 239820093 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA CCCCCACCCT TGCGGCCATC GAACGCCCCG CGTCCGGCCA GACACCCTAC AGCGCATGGA TGCAGACCGA CACCTTGCAC TCGCTGCAGC GTACCGTCAG CGACCACCCG GGCGAGCACG CCTGGATCGT GCATGTGCAG GTGTCCGAGC TCTACTGGAT GCTCATCATC AAGGAGATCC AGTCGGCCCA GGCGTTCCTG CGGGCCGACG ACCTCCCGCA GGCCTGGCGC ACGTTGCAGC GCGTCGTTGC GCACCATGCG CCGCTGGACG CCATCTGGCG CTCGATCGAC TGGATGACGC CGAACGACCT GCTCGCGATC CTTTCACGCG CGGTCGCCAC GCACGGCAAG GACACGGCGC TGCAAGGCTG GACCTACCGG CAGATGGTCT ATCTGCTGGG CATCAAGCAG GCCGAGCACC TGCAGCATTT CGAGCCCCAG CCCCATCGCT GGGAACAGCT CAACAAGGCG CTGGCCGAAC CCAGCCTGTA CGACGACGTG CTCGCCTTCC TCCGGCGCCG GGGGCTGGGC GTGCCGGCCG AATTGCTGGC GCGCGACCTG GCCGCGCCCT ACACGCCCCG CAAGGAGGTC GAAGAGGTCT GGCGCCAGAT CTACGCCGAC CCCAACGCGA ACATCGAGCT CCAGCAGCTC GGCGAGACCC TGGCCGACAT CGCCGAGGGC TTCTGCAACT GGAAATTCCG CCACCTGATG GCGACGCGGC GAACCTTCGG TGCACGGCCG GCCTACTTCG GCACCGAAGG CGTTGCGTGG CTCGTGCCCA CGATGGACGA GATTCCTTTT CCCGAGCTCT GGTCGGCGCG CACCTTCATC GGTGACCCGC CGCCCGCGTG CCCGCACATG GCCCGGCAGG GGAAATGA
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Protein sequence | MSNTPTLAAI ERPASGQTPY SAWMQTDTLH SLQRTVSDHP GEHAWIVHVQ VSELYWMLII KEIQSAQAFL RADDLPQAWR TLQRVVAHHA PLDAIWRSID WMTPNDLLAI LSRAVATHGK DTALQGWTYR QMVYLLGIKQ AEHLQHFEPQ PHRWEQLNKA LAEPSLYDDV LAFLRRRGLG VPAELLARDL AAPYTPRKEV EEVWRQIYAD PNANIELQQL GETLADIAEG FCNWKFRHLM ATRRTFGARP AYFGTEGVAW LVPTMDEIPF PELWSARTFI GDPPPACPHM ARQGK
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