| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5369 |
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| Symbol | |
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| ID | 7975830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 76157 |
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| End bp | 77020 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795963 |
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| Product | Triphosphoribosyl-dephospho-CoA synthase |
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| Protein accession | YP_002947237 |
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| Protein GI | 239820052 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1767] Triphosphoribosyl-dephospho-CoA synthetase |
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| TIGRFAM ID | [TIGR03132] triphosphoribosyl-dephospho-CoA synthase MdcB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.193045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGAACT TCGCCCTTTC GCCGTCGCCC GATTCGCGGC CGACACCCGC TGCGATCGGA
CGCGCGGCCA CGCTCTCGCT CTACGACGAA CTGTCGCTGT CGCCCAAGCC CGGCCTGGTC
ACATTGATCG ACTGCGGCAG CCACGACGAC ATGGACGCAC ACACCTTCAT GCGCAGCCTG
TTCTCGCTGC GCCGCTACTT CGTCCGGATC GCCGAGGCCG GCGCCGCAGG CGCGGATTTC
GCAGTGCTCG AGCGCCACGG CATTGCGGCT GAGGCGCGCA TGCTGGCCGC CACCGGCGGC
GTCAACACGC ACCGCGGCGC GATCTTCATG CTCGGCCTGC TGTGCGCCGC GGCCGGTGCC
GCGCTGCGGG CGCATGGCGG TGCATGGGAT CCGGCGGCAC TGCGCGATGC GCTGCGCCGG
CACTGGGGCG AGGCACTGGC CGGGCGCAGC CAGCGCGCGC CCGTGCTGCC GGGCGGCATC
GCGGCACGGC GCCATGGCCT GCGCAGCGCA TCCGAAGAAG CGGCGCTGGC GTTTCCGGTG
CTGTTCGAGA CGGCGCTTCC GGCACTGAGG AAGGCGTTGG CACGGGGCCT CGCGCCCCGC
CTGGCGCGGC TCGATACCTT GTTCCACATC ATTGCGGTGC TGGACGACAG CAATCTTGCG
CACCGCGGCG GCCTGGCCGG CCTGCGCGGC GCCCAACGCG CGGCGCAGGG CTTTCTCGAT
CGGGGCGGGA TCGCACGGCC CGAAGGGTTG CAAGAGGCGC AAGCGATCGC AGACGATTTC
GTGCGGCAGC GCCTGTCGCC CGGCGGCGCG GCAGACACGC TGGCCGCTGC GTGCTGGCTC
CAGCGCGTGT GCCCAGGCTC ATGA
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| Protein sequence | MRNFALSPSP DSRPTPAAIG RAATLSLYDE LSLSPKPGLV TLIDCGSHDD MDAHTFMRSL
FSLRRYFVRI AEAGAAGADF AVLERHGIAA EARMLAATGG VNTHRGAIFM LGLLCAAAGA
ALRAHGGAWD PAALRDALRR HWGEALAGRS QRAPVLPGGI AARRHGLRSA SEEAALAFPV
LFETALPALR KALARGLAPR LARLDTLFHI IAVLDDSNLA HRGGLAGLRG AQRAAQGFLD
RGGIARPEGL QEAQAIADDF VRQRLSPGGA ADTLAAACWL QRVCPGS
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