Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5357 |
Symbol | |
ID | 7975818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 61977 |
End bp | 63161 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795951 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_002947225 |
Protein GI | 239820040 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.284642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAAG CCGTCATCGT TTCCACCGCA CGCACGGGCA TCGGCCGCGC GTTCCGCGGC GCATTGAACA ACATCAAGTC GCCCACGCTG ATGGGCCACG CGGTCCAGCA CGCCGTGCAG CGGGCGGGCA TCGATCCCGG GGAAGTGGAG GACGTGGTGA TCGGCAGCGC GATGGCTGCC GGCACCGCGG GCATGAACAT CGGGCGCCTC GCGGCGCTCG CAGCGGGCCT GCCGCAGTCG GTGCCGGGCC AGACGATGGA CCGGCAGTGC GCCTCGGGCC TGATGGCCAT CGCGACGGCA GCCAAGCAGA TCATCGTCGA CGGCATGGAT GTGACCGTGG GCGGCGGGCA GGAGAACATC TCCGCCGTGC AGAACCCCTT CGTCAAGTGG GTGGGCGAAG AGGCCGATCC GCTGCTCGTT GCACGCGTGC AGCACGCCTA CATCCCGATG CTCCACACGG CCGAAATCGT CGCGAAGAAG TACGGCATCT CGCGCGAGGT GCAGGACGCG TATTCGGCCG AAGCACAGCG CCGCACCGCG CTCGCGCAGG AGCACCACCT GTTCGATGAC GAGATCGTGC CGATCACGGC GCGCATGGCC GTGGCCGACA AGCAGACGGG CGCGGTCAGC TACCGCGAGG TCACGCTCGA CCGCGACGAG GGCAACCGCC CCGACACCAC GCTCGAAGGC CTTTCCCAGC TCAAGCCCGT CGTCGAAGGC GGCGTGATTA CCGCCGGCAA TTCGAGTCAG CTCTCGGATG GCGCATCGGC CTGCGTGCTG GTGGAGCGCA CGGTTGCCGA GCGCCGCGGG CTCAAGGCGC TGGGCACCTA CCGCGGCATC GCAGTGGCCG GCCTCGCGCC GGAAGAAATG GGCATCGGCC CGGTGCTGGC CGTGCCCAAG CTGCTGAAGA CCCACGGGCT CACGGTGAAC GACATCGGCC TGTGGGAACT GAACGAGGCC TTCGCCTGCC AGGTGCTGTA CTCGCGCGAT CGTCTGGGCA TCGACCCCGA GAAGCTGAAC GTCAACGGCG GCGGCATCAC GATCGGCCAT CCCTACGGCA TGACCGGCTC GCGGCTGGTG GGACATGCGC TCATCGAGGG CAAGCGGCGC GGCGCGCGCT TCGTCGTCGT GACGATGTGC GTCGGCGGCG GCATGGGTGC CGCGGGCCTG TTCGAAGTGG CCTGA
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Protein sequence | MREAVIVSTA RTGIGRAFRG ALNNIKSPTL MGHAVQHAVQ RAGIDPGEVE DVVIGSAMAA GTAGMNIGRL AALAAGLPQS VPGQTMDRQC ASGLMAIATA AKQIIVDGMD VTVGGGQENI SAVQNPFVKW VGEEADPLLV ARVQHAYIPM LHTAEIVAKK YGISREVQDA YSAEAQRRTA LAQEHHLFDD EIVPITARMA VADKQTGAVS YREVTLDRDE GNRPDTTLEG LSQLKPVVEG GVITAGNSSQ LSDGASACVL VERTVAERRG LKALGTYRGI AVAGLAPEEM GIGPVLAVPK LLKTHGLTVN DIGLWELNEA FACQVLYSRD RLGIDPEKLN VNGGGITIGH PYGMTGSRLV GHALIEGKRR GARFVVVTMC VGGGMGAAGL FEVA
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