| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5338 |
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| Symbol | |
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| ID | 7975799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 39830 |
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| End bp | 42115 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795932 |
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| Product | malic enzyme |
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| Protein accession | YP_002947206 |
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| Protein GI | 239820021 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.121995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACG ACAAACTGCG CGAAGCCGCA CTCGACTACC ACCGCTATCC CACGCCCGGC
AAGATCTCGG TGAACCCGAC CAAGCCGATG GCCACGCAGC GCGACCTTGC GCTCGCATAC
TCGCCCGGCG TGGCCGAGGC CTGCATGGAG ATTGCGCGCG ACCCGGCCGA GGCCATGAAC
CTCACCTCGC GCGCCAACCT CGTGGCCGTC ATCACCAACG GCACCGCGGT GCTGGGCCTG
GGCAACATCG GGGCGCTGGC CGGCAAGCCG GTGATGGAAG GCAAGGCCTG CCTCTTCAAG
AAGTTTGCCG GCATCGACGT GTTCGACATC GAGCTCGACG AGAACGACCC CGACGCGCTC
ATCGACACCA TCGCGCGCAT GGAGCCCACC TTCGGCGGCA TCAACCTGGA GGACATCAAG
GCGCCCGAAT GCTTCTACAT CGAGAAGAAG CTGCGCGAGC GCATGAAGAT CCCGGTCTTC
CACGACGACC AGCACGGCAC CGCCATCGTC GCGGCCGCCG CCATCCTCAA TGCGCTGCGG
CATGTGAAGA AGGACATCCG CGAAGTGAAG CTGGTGGCCT CGGGCGCCGG TGCGGCGGCG
CTGGCCTGCC TCGACCTGAT CGTGAGCCTG GGCCTGCCGA TGCAGAACAT CTACGTGTCC
GACAGCGCAG GCGTGGTGTA CACCGGCCGC AAGGAGCAGA TGGACCCGAA CAAGGCCCGC
TATGCGCAGG AGACCCCGGC GCGCAAGCTG GCCGACGTGA TAGCCGGCGC CGACATCTTC
CTCGGCCTCT CGGCCGGCGG CGTGCTCAAG CCCGAGATGG TGAAGGAGAT GGCGCGCGAC
CCGATCATCC TTGCCATGGC CAACCCGGCG CCGGAGATCC TGCCGGAAGA CGCGCTGGCC
GTGCGCCCCG ATGCGATCCT GGGCACCGGC CGGTCGGACT ATCCGAACCA GGTCAACAAC
GTGCTGTGCT TTCCGTTCAT CTTCCGCGGC GCGCTCGACG TGGGTGCGAC GGCCATCAAC
GAAGAGATGA AGCTTGCCGC GGTGCGCGCC ATCGCCGAAC TCGCGCATGC CGAGATTCCC
GAGGTGGTGG CGCAGGCCTA CGGCGCGCTC GGCCTGCGCT TCGGCCGCGA CTACCTGATC
CCCAAGCCCT TCGACCCGCG GCTGATCGAG GCGGTCGCGC CCGCGGTGGC GCAGGCCGCG
GTCGACAGCG GCGTGGCGAC GCGGCCGATC GCCGACATGA AGGCCTACCG CCAGCGCCTG
TCGCAGTTCG TCTACCAGTC GGGCAGCAGC ATGCAGCCGC TGTTCGCCGC CGCCAAGCAG
TCGCCCAAGC GCGTGGTCTA CGCCGAGGGC GAGGACGAGC GCGTGCTGCG CGCCGCGCAG
GTGGTGGTCG ACGAAGGCCT GGCACGCCCG CTGCTGCTGG GCCGGCCCGA AGTGATCGCC
GAGCGCATCG CGCAGTACGG CCTGCGCCTC GCGCTGGGCA CCGACTGCGA GGCCGTCGAC
CCACTCGATG CGGCCGTGCA TGGCGATGCG GCCGATGCCT ACTACCAGCT CAAGCGCCGC
GAGGGCGTCT CCCGCCTGGT GGCGCAGACC GAGATGCGCA GCCGCGGCAC GCTGCTGGCG
GCCATGCTGG TGCGCCAGGG CCGGGCCGAC GCCATGCTGT GCGGCACGCT CGGCAGCTAC
GGCGACCACC TGCGCCATGT GCGCGACGCG ATCGGCCTGC GCGCGGGCGC CAGGACCATG
GCCGCGATGC AGATGCTGAT GCTGCCGGGG CGCCAGCTCT TCATCTGCGA CACGCACGTG
AACCGCGACC CCGATGCGGC GCAGATCGCC GAGATCGCGC TGCTCGCGGC CGAGGAGGTG
CGCCGCTTCG GCGTGACGCC GAGCGTGGCG CTGCTGTCGC ACTCGAACTT CGGCGGCTCG
GACGCGGCCT CGGCCGTGAA GATGCGCGAG GCGCTCGCGC TCATCAAGGC GGCCGATCCG
CAGCTCGCGG TGGAAGGCGA GATGCGCGGC GACGCGGCGC TGTCCAAGAC CATCCTCGAT
CACGAGTTTC CGGATTCGGC GCTGGAGACC GAGGCTAACG TGCTCGTCAT GCCCAACGTC
GACGCGGCCA ACATTTCATA CAACCTGCTG CGCATGGCGG CCGGCAGCGG CATCACGGTG
GGCGGCATCC TGCTGGGCGC GGCGCGCTCG GTGCACATCC TCACGCCGTC GTCCACCGTG
CGCCGCATCG TCAACATGAC GGCGCTGGCG GTGGTCGATG CCAACTCGCA CCGCAATGCG
GCCTGA
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| Protein sequence | MSDDKLREAA LDYHRYPTPG KISVNPTKPM ATQRDLALAY SPGVAEACME IARDPAEAMN
LTSRANLVAV ITNGTAVLGL GNIGALAGKP VMEGKACLFK KFAGIDVFDI ELDENDPDAL
IDTIARMEPT FGGINLEDIK APECFYIEKK LRERMKIPVF HDDQHGTAIV AAAAILNALR
HVKKDIREVK LVASGAGAAA LACLDLIVSL GLPMQNIYVS DSAGVVYTGR KEQMDPNKAR
YAQETPARKL ADVIAGADIF LGLSAGGVLK PEMVKEMARD PIILAMANPA PEILPEDALA
VRPDAILGTG RSDYPNQVNN VLCFPFIFRG ALDVGATAIN EEMKLAAVRA IAELAHAEIP
EVVAQAYGAL GLRFGRDYLI PKPFDPRLIE AVAPAVAQAA VDSGVATRPI ADMKAYRQRL
SQFVYQSGSS MQPLFAAAKQ SPKRVVYAEG EDERVLRAAQ VVVDEGLARP LLLGRPEVIA
ERIAQYGLRL ALGTDCEAVD PLDAAVHGDA ADAYYQLKRR EGVSRLVAQT EMRSRGTLLA
AMLVRQGRAD AMLCGTLGSY GDHLRHVRDA IGLRAGARTM AAMQMLMLPG RQLFICDTHV
NRDPDAAQIA EIALLAAEEV RRFGVTPSVA LLSHSNFGGS DAASAVKMRE ALALIKAADP
QLAVEGEMRG DAALSKTILD HEFPDSALET EANVLVMPNV DAANISYNLL RMAAGSGITV
GGILLGAARS VHILTPSSTV RRIVNMTALA VVDANSHRNA A
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