8 homologs were found in PanDaTox collection
for query gene Vapar_5267 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_5267  protein of unknown function DUF350  100 
 
 
72 aa  140  6e-33  Variovorax paradoxus S110  Bacteria  normal  0.472979  n/a   
 
 
-
 
NC_008825  Mpe_A0248  hypothetical protein  75 
 
 
74 aa  112  2.0000000000000002e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.31988 
 
 
-
 
NC_011992  Dtpsy_3447  protein of unknown function DUF350  72.22 
 
 
73 aa  109  1.0000000000000001e-23  Acidovorax ebreus TPSY  Bacteria  normal  0.401801  n/a   
 
 
-
 
NC_008782  Ajs_4097  hypothetical protein  72.22 
 
 
73 aa  108  2.0000000000000002e-23  Acidovorax sp. JS42  Bacteria  normal  normal  0.799552 
 
 
-
 
NC_010002  Daci_4787  hypothetical protein  63.89 
 
 
72 aa  101  3e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.577172  normal  0.471696 
 
 
-
 
NC_008752  Aave_4738  hypothetical protein  65.28 
 
 
74 aa  100  6e-21  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0110  hypothetical protein  50 
 
 
70 aa  59.3  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.338698  normal  0.199008 
 
 
-
 
NC_013456  VEA_003908  membrane protein  44.9 
 
 
138 aa  40.8  0.006  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
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