| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5260 |
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| Symbol | |
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| ID | 7972693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5580950 |
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| End bp | 5581330 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795854 |
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| Product | S-adenosylmethionine decarboxylase proenzyme |
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| Protein accession | YP_002947128 |
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| Protein GI | 239818218 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
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| TIGRFAM ID | [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACGGGC TGCACCTCAC CGCCGATCTC CACGACTGCC AATGCGCCAT GCAATGGCTC
ACCGACAAGG AGGCGCTCGG CGCCGTCTGC CTCAAGGCGG CAACGGCCGC CGGGCTGCAG
CCGGTGGGCA AGCTGGTCCA CGGCTTTCCG GCCACGCCGC AAGGGCCGGG CGGCGTCACG
GCCACCGTGC TGCTGGCCGA ATCGCACCTG TGCATCCACA CCTGGCCCGA ACAGCGCGGC
GCCACGCTCG ACGTCTACGT GTGCAACTTC GGCGGCGACC ATTCGGCCAA GGCGCATGCG
CTGATGGAAT GCCTGGTTTC TCTGTTCAAG CCCGGCCACA GCGAACGCAA CGAGCTGCTG
CGCGGCAAGG TGGCGGCTTG A
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| Protein sequence | MHGLHLTADL HDCQCAMQWL TDKEALGAVC LKAATAAGLQ PVGKLVHGFP ATPQGPGGVT
ATVLLAESHL CIHTWPEQRG ATLDVYVCNF GGDHSAKAHA LMECLVSLFK PGHSERNELL
RGKVAA
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