| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5250 |
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| Symbol | |
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| ID | 7972683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5571472 |
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| End bp | 5572644 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795844 |
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| Product | Pirin domain protein |
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| Protein accession | YP_002947118 |
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| Protein GI | 239818208 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00018028 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCGGG TGCGCCCCGA TATTCCCGAC AGCAGCGTTG CCGCGCATCC GGCCGCGGCA
CGCCCAACCG AAAGGAATAC CGAGGTGTCC AGCAACAACG ACAGCAGCAG CCCTATCGAG
GAAGGCCGCA GCCCCGTGCT GCAGGTGAGC CCGCTCGGCT TCCCGTGGCA GACGATCGAC
CCGTTCCTGT TCTGCGTCTA TCACGACGAC GCCTATCCGA AGGCCAACGC GCAGATGGGG
CCCGAGGCGC CGCTCGCGGG CCGCCAGATC GGCCAGGACT TCAGCCGCAA GGACGGCTGG
AGCATGTACC ACGGCGACAC GGTGCCGGGC TTTCCCTCGC ACCCGCACCG CGGCTTCGAG
ACGGTGACCA TCGTGCGCAA GGGGCTGGTC GACCATTCCG ATTCGCTGGG CGCCACCGCG
CGCTTCGGCG GCGGCGACGT GCAGTGGCTC ACGGCGGGCA AGGGCATCGT GCATTCGGAG
ATGTTTCCGC TGCTCGATGC CAACGCGCCC AATCCGCTCG AACTGTTCCA GATCTGGCTC
AACCTGCCGG CCAGAAGCAA AATGGCCGAG CCGCACTTCA CGATGTTCTG GTCGGAAGCC
ATTCCGCACT TTGCGTCCGA CGACGCGGCG GGCGGCCGCA CCGAGATCGC GGTGGTCGCG
GGCCGGTTCG GCGGCACGGC CGCGGGCAAC GGAGAGCCGA TCCGCCCGCT GCCGCCGCCG
CCCGATTCAT GGGCCGCGCA GGCCGATGCC GACGTCGCGA TCTGGACGCT CAAGATGACG
CCCGGCGCGC AATGGACGCT GCCGCCCGCC GCGGGCGAAG GCACGCGGCG CATGCTGTAC
TTCTTCAAGG GCGCGGTGGC CACCATCGCA GGCCGGCGCG TGGAAGGCCC GGCCGCCATC
GAACTGCGCG CGGACACCGC CGTCGAGCTG CGCAACGGCG ATGAAGAGCC GGGCGAATTC
CTGCTGCTGC AGGGGCGCCC CATTGCCGAG CCGGTGGCGC AGTACGGTCC GTTCGTGATG
AACACGCAGG CCGAGATCAG CCAGACGCTG GCCGACTACC GCCGCACGCA GTTCGGCGGC
TGGCCCTGGA GCGATCCGGC GCCGGTGCAT GGCCGCGATG CGGCGCGCTT TGCGCGGCAC
CCCGGCGGGC GCGAGGAAAA GCCGGCGACC TGA
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| Protein sequence | MKRVRPDIPD SSVAAHPAAA RPTERNTEVS SNNDSSSPIE EGRSPVLQVS PLGFPWQTID
PFLFCVYHDD AYPKANAQMG PEAPLAGRQI GQDFSRKDGW SMYHGDTVPG FPSHPHRGFE
TVTIVRKGLV DHSDSLGATA RFGGGDVQWL TAGKGIVHSE MFPLLDANAP NPLELFQIWL
NLPARSKMAE PHFTMFWSEA IPHFASDDAA GGRTEIAVVA GRFGGTAAGN GEPIRPLPPP
PDSWAAQADA DVAIWTLKMT PGAQWTLPPA AGEGTRRMLY FFKGAVATIA GRRVEGPAAI
ELRADTAVEL RNGDEEPGEF LLLQGRPIAE PVAQYGPFVM NTQAEISQTL ADYRRTQFGG
WPWSDPAPVH GRDAARFARH PGGREEKPAT
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