Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5211 |
Symbol | |
ID | 7969870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5533670 |
End bp | 5533942 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644795805 |
Product | translation initiation factor IF-1 |
Protein accession | YP_002947079 |
Protein GI | 239818169 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
TIGRFAM ID | [TIGR00008] translation initiation factor IF-1 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.7886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAGG AAGAACTGAT CGAAATGAAC GGCGCAGTGA CCGAAGTCCT GCCCGACTCG CGCTACCGCG TGACGCTCGA CAACGGCCAT CAGCTGATCG CCTACAGCGG CGGCAAGATG CGCAAGCACC ACATCCGCAT CCTGGCGGGT GACAAGGTGT CGCTCGAACT CTCGCCCTAC GACCTGACCA AGGGCCGTAT CACCTTCCGC CACCTGGAGC GTCGCGGCCC GCCGCCGACC AACTCCGGCA ACAACAACGC ACCTCGCCGC TGA
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Protein sequence | MPKEELIEMN GAVTEVLPDS RYRVTLDNGH QLIAYSGGKM RKHHIRILAG DKVSLELSPY DLTKGRITFR HLERRGPPPT NSGNNNAPRR
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