Gene Vapar_5194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5194 
Symbol 
ID7969853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5517430 
End bp5517882 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content71% 
IMG OID644795788 
Productregulatory protein RecX 
Protein accessionYP_002947062 
Protein GI239818152 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.910753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTCG GCGCCCCTTC CCTCAAAGGC CGCGCACTGC GGCTCCTGAG CCAGCGCGAG 
CATTCGCGCG CGGAACTGGA GCGCAAGCTG GCCAGGCACG AAGAAACACC GGGCGAACTG
GCCCGCGCGC TCGACGAATT GGCCGCCAAG GACTTCATCA GCGAGCCGCG CGTGGTGGCC
TCGGTGCTGA ACCAGCGCGC CGCCCGCTCG GGCGCGCTGC GGGTGCGGCA GGAGCTGCAG
GCCAAGGGCA TTGCGCCCGA GGCCATTGCA CAGGCCATGG CCAGCCTGCA GGACACCGAG
GTGGAGCGCG CCACGGCCCT GTGGCGCCGC CGCTTCGACG CCCCGCCCGC CGATGCGAAG
GAGCGCGCCA GGCAAACGCG CTTCCTGTTG GCGCGCGGCT TTGCGGGCGC GGTGGTGGCC
AAGGTGCTGC GGAGTGATTT CGACGAAGAC TGA
 
Protein sequence
MAFGAPSLKG RALRLLSQRE HSRAELERKL ARHEETPGEL ARALDELAAK DFISEPRVVA 
SVLNQRAARS GALRVRQELQ AKGIAPEAIA QAMASLQDTE VERATALWRR RFDAPPADAK
ERARQTRFLL ARGFAGAVVA KVLRSDFDED