| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5192 |
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| Symbol | |
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| ID | 7969851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5515085 |
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| End bp | 5516251 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795786 |
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| Product | succinyl-CoA synthetase, beta subunit |
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| Protein accession | YP_002947060 |
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| Protein GI | 239818150 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTC ACGAGTACCA AGGCAAGGAA ATCCTTGCCA AGTTCGGCGT GCCGGTGCCG
CGCGGCATTC CGGCCTATAC GGTTCAGGAG GCGGTCGAGG CCGCCCAGAA ACTTGGAGGC
CCGGTGTGGG TCGTCAAGGC CCAGATCCAC GCGGGTGGCC GCGGCAAGGG CGGCGGCGTC
AAGGTCGCCA AGTCCATCGA GGACGTCAAG AAGCTCGCCG GCGAGATCCT CGGCATGCAG
CTCAAGACCC ACCAGACCGG CCCCGAAGGC CAGAAGGTGC GCCGCCTCTA CATCGAAGAT
GGCGCCGACA TCAACAAGGA ATACTACGTC TCGGCCGTGA CCGACCGCGC CACGCAGAAG
GTCGCGTTCA TTGCCTCGAG CGAAGGCGGC ATGGACATCG AGGAAGTGGC CCACTCCTCG
CCCGAGAAGA TCATCACCGT GTTCGCGGAC CCCGAAAAGG GCCTGACCGA CGAGCAGGCC
AAGCAGATCG CCGACGGCAT CGGCATGCCG GCCGATTCCA CCGCCCAGAC GGTCGACATC
CTCAAGAAGC TCTACACCTG CTACATGGAG ACGGACGCCT CGCTGGTCGA GATCAACCCG
CTCAACCGTG ACAGCAAGGG CAAGGTCATG GCGCTGGACG CCAAGTTCAA CTTCGACAGC
AACGCGCTGT TCCGCCACCC CGAAATCGTG GCCCTGCGCG ACCTCGACGA AGAAGACGCG
GCCGAAGTCG AAGCCTCCAA GTTCGACCTC GCCTACATCT CGCTGGATGG CAACATCGGC
TGCTTGGTGA ACGGTGCCGG CCTGGCCATG GCCACCATGG ACACCATCAA GCTGTTCGGC
GGCGAGCCGG CCAACTTCCT GGACGTGGGC GGCGGCGCCA CCCCCGAGAA GGTCACCGAA
GCCTTCAAGA TCATGCTGAA GAACAAGAAC GTGGAAGCCA TCCTCGTGAA CATCTTCGGC
GGCATCATGA AGTGCGACAC CATCGCCACC GGCGTGATCG CAGCCTGCAA GGCCGTGAAC
CTGCAAGTGC CGCTGGTCGT GCGCATGAAG GGCACCAACG AAGTCGAAGG CAAGAAGCTG
CTGGCCGATT CGGGCCTGCC GATCATCAGC GCCGACACCA TGGCGGACGC GGCCCAGAAG
GTCGTCGCAG CGGTCAAAAA GGCCTAA
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| Protein sequence | MKIHEYQGKE ILAKFGVPVP RGIPAYTVQE AVEAAQKLGG PVWVVKAQIH AGGRGKGGGV
KVAKSIEDVK KLAGEILGMQ LKTHQTGPEG QKVRRLYIED GADINKEYYV SAVTDRATQK
VAFIASSEGG MDIEEVAHSS PEKIITVFAD PEKGLTDEQA KQIADGIGMP ADSTAQTVDI
LKKLYTCYME TDASLVEINP LNRDSKGKVM ALDAKFNFDS NALFRHPEIV ALRDLDEEDA
AEVEASKFDL AYISLDGNIG CLVNGAGLAM ATMDTIKLFG GEPANFLDVG GGATPEKVTE
AFKIMLKNKN VEAILVNIFG GIMKCDTIAT GVIAACKAVN LQVPLVVRMK GTNEVEGKKL
LADSGLPIIS ADTMADAAQK VVAAVKKA
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