Gene Vapar_5177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5177 
Symbol 
ID7969836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5497795 
End bp5498286 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID644795771 
Productmolybdenum cofactor biosynthesis protein C 
Protein accessionYP_002947045 
Protein GI239818135 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0315] Molybdenum cofactor biosynthesis enzyme 
TIGRFAM ID[TIGR00581] molybdenum cofactor biosynthesis protein MoaC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCCC TCACCCACTT CGACGCCCAG GGCCAGGCCC ACATGGTCGA CGTGGCGGCC 
AAGCCCGCCA CCCATCGCGT GGCCGTGGCC ACCGGCCGCA TCGAGATGCA GCCCGCCACG
CTGGCGCTGA TCGAATCGGG CACCGCCAAG AAGGGCGACG TGCTCGGCAT CGCGCGCATC
GCCGGCATCC AGGCCGCCAA GAAAACCAGC GATTTGATCC CGCTGTGCCA CCCGCTGGCG
CTCACGCGCG TGGCGCTGGC CTTTGCGCTG GCCGAAAAAG GCAACGCGCC GCAGGTGGTG
TGCACCGCCA CCGTCGAGAC CGTGGGGCCG ACCGGCGTCG AGATGGAAGC GCTCACCGCC
GTGCAGGTGG CGCTGCTCAC CATCTACGAC ATGTGCAAGG CCGTGGACCG CGGCATGCGC
ATCACCGACG TGCACGTGCT GGAAAAGCAT GGCGGCAAGT CGGGCAGCTA CCTGGCCGAC
CCTCAAGGCT AG
 
Protein sequence
MSSLTHFDAQ GQAHMVDVAA KPATHRVAVA TGRIEMQPAT LALIESGTAK KGDVLGIARI 
AGIQAAKKTS DLIPLCHPLA LTRVALAFAL AEKGNAPQVV CTATVETVGP TGVEMEALTA
VQVALLTIYD MCKAVDRGMR ITDVHVLEKH GGKSGSYLAD PQG