| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5126 |
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| Symbol | |
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| ID | 7971497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5441279 |
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| End bp | 5441593 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644795720 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946994 |
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| Protein GI | 239818084 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5605] Predicted small integral membrane protein |
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| TIGRFAM ID | [TIGR02229] caa(3)-type oxidase, subunit IV |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCCG CCACCGGCCA GCAGCATCCG ATCAGCCTCT ATCTCAAGAT CTGGGGGCTG
CTGTTCGTGC TCAGCACGAT GTCCTACCTT GTCGACTATT TCCATTTCCA GGGCTACCTG
CGCTGGACGC TGATCGTCAC CTTCATGCTG CTGAAGGCGG GGCTGATCGT CGCGGTCTTC
ATGCACATGG CCTGGGAGCG GCTGTCGCTG GTCTATGCCA TCCTGGTGCC GCCGCTGTGC
CTGCTGGTGC TGGTCGGCCT GATGGCGGCG GAGGCCGGCC ACACCTACCT GACGCGGCTG
TTGTTCTTCC ACTGA
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| Protein sequence | MNPATGQQHP ISLYLKIWGL LFVLSTMSYL VDYFHFQGYL RWTLIVTFML LKAGLIVAVF
MHMAWERLSL VYAILVPPLC LLVLVGLMAA EAGHTYLTRL LFFH
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