| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5117 |
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| Symbol | |
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| ID | 7971488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5427600 |
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| End bp | 5430014 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795711 |
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| Product | protein of unknown function DUF1631 |
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| Protein accession | YP_002946985 |
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| Protein GI | 239818075 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG CGCGGTCCGC TTCCTCCCTG CAGCTCGCAC GCGAGACGCG CGAGCGCTTC
GTTCGCGCCA CCGAGGGCGT CATCGTCCCG CTGGCGCAGG CGATACGGGA CCGCCTGACG
CAGCAGGCCT CGGAAATCGG CAGTGCGCGC GCCATGCAGG AGAGCCGCGA CGATTTCGTG
GCGTTCCAGG GCCAGGCCTC GCAATGGGTG TCGCTCGCGC AGGCGGGCTG GCGCAAGTCG
GTGGACGCGC CAGCAGGTGC GGTGCCCGCC GCGCCGGCCG CGAAGCTGCG GCTCGAACTC
ATCGGCGACG ATGCCATGGA GAGCAGCATC CTGTCGTCGC GCCTGGCGCA GCTGATCCAC
GACAAGGCCA GCTTCGAACT CAGCGACCTG CGGCTGCGCA TCCAGTTCCT GGAAGGCACC
GCAGAACTCG ACGCCCACGA CGTGCTCAGG CCCGAAACCC TGGCCCGGCT GCTGGTGGAC
CAGTGGCTGG CGGCCGGCCT GAGCCGCGCG CTCTGGGCCC GCGTGCAGGA CACCGTGCAG
CAGCAGCTGG TCGGCGTGGT CGTCAAGGCC TACGAAGACG CCAACGCCTT CCTGGTTTCG
CAGGGCGTGA TGCCCGAAAT CGATCTCAAG AGTTTCGTGC GCCGCACCGG CAGCAGCACC
ACCGGCGGCG GCGCCACCGG GCCGGCCACG ATGCCGGCCT CGCCCCATGC CGGCGGCGCC
ATGCGGCCAG CAGGGGCCGT GCAGCGCCAG GGCGGTGCCG ATACATCCCC GCAGGCACGG
GGGGCGTTCG CGCCGTCCGC GCCGGCCTTC ACCACGGGCG GCTCGCCGCT GCTGGCCGCG
CGCCAGCGTG CGCAGACGGC GCTGCTGAGC CTCAAGCGCT TTGTCGCCGC GCGCATCGGC
GCGGAAACGC CGGCCTCGCC TTCGGCTTCG ATGACGACCA CGGGAATGGA CGGCCATGCG
GCCGTCGCGG GGTCCGGCGC GACCGGTGCG GCTGCCCCGC GTGCCGTGTC CCAGACCTTC
GCCGGCATGA TCGCCGAGGC CGAAGCCGCC TACCGGGCCG CCGCCACGCA GTACATGCAG
GGCTCGGTGC CGGGCGCCGC GGAGCAGGCC ACCCTCATCC AGCAGGCCTC GGTCGACCTT
CGGCGGCGCA GCGCGGAACT CAAGAAAAAG GCGCCCACCA CCGCCGACAA GGCCACGGTC
GAGATCGTCG CGCTCATGTT CCAGGCCATC CTTGCCGAGG AGCGCATTCC CTTCTCGGCG
CGCGTGTGGT TTGCGCGCCT GCAGATGCCG GTGCTGCGCG TGGCCATTGC CGAGCCCGAG
TTCTTCGGCA CGCTGCAGCA CCCGGCGCGC ATGCTGATCG ACCGCATGGG CTCCTGCGTG
ATGGGCTTCG ATGCCGCGGC CATCTCGGGC AGTGCGCTCG AAGGCGAGAT CCGGCGCGTG
GTGCAGGTGA TCGAGCAGTA TCCCGAAACC GGCCAGCGCG TCTTCAAGCT GGTGTTCGAC
GAGTTCGTGG CCTTCCTGAA CCGCTATCTC ACGCAAAGCG ACGCCACCCA GCGCGTCATG
AGCGTGGCGC AGCAGGTCGA GCAGAAGGAA ACGATGGCGA TCCAGTACAC CATCGAGCTG
CGCAAGATGC TCAACGACAT GCCGGTGCGC GAGGAGATCC GCGAGTTCCT CTTCAAGGTC
TGGGCCGAGG TGCTGGCGAT TGCCGCGCTG CGCTACGGCG CCCAGGGCGA GCAGACGGTG
ATGCTCAAGC GCGTGGCCTC CGAGCTGGTG TGGGCGGCGA GCGCCAAGCC CAACCGCGCC
GACCGCGCCC GCGTGATCCA GGACCTGCCG CAGCTGCTGC AGCGCCTGCG CCTGGGCATG
AACCTGCTGG GCATCATCGA CGAGCCGCAG GAAGCCCACA TCAAGGCCAT CGGCGCCACC
TTGTCCGATG CCTTCCTGTC GAAGACCGAG GCCATTCCCG CGGCCAAGAT CGAGGCCATG
GCCGAGCGCC TCGCGCACCT GGAAGATTTC GTCACCGACG ACGGCGGCGC CTCCAGCCTG
CCGCTCGATG CGACCAGCAT CGAACTGCTG CTGGGCGTGG ATGCAGCCTC GATCGAGGTC
GTGGCCGACA CCGTGGGCGG CGTACCGGCC GAAGACATGC TCGCGTGGGC CCACGAGCTG
GAGGTGGGCA ACTGGTTCAT GCTCGACCAC AACGACCGCG TGAGCCAGGT GCAGTTCGTC
TGGCGCAGCG ACCGCAAGCA GCTGCACCTG TTCGCCTCGG CCGACGGCCG CAGCTTCCTG
ATCCAGGTCG GCCGGCTGGC CAACTACCTG CAGGCGGGCC TGCTGGTGCC GGCCGAGGAA
GAAACGCTCA CGGTGCGCGC CACGCGCGAG GCGCTGGCCA AGCTCGATGC CAATCCGGAG
CGCCTGCTGA ACTAG
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| Protein sequence | MSTARSASSL QLARETRERF VRATEGVIVP LAQAIRDRLT QQASEIGSAR AMQESRDDFV
AFQGQASQWV SLAQAGWRKS VDAPAGAVPA APAAKLRLEL IGDDAMESSI LSSRLAQLIH
DKASFELSDL RLRIQFLEGT AELDAHDVLR PETLARLLVD QWLAAGLSRA LWARVQDTVQ
QQLVGVVVKA YEDANAFLVS QGVMPEIDLK SFVRRTGSST TGGGATGPAT MPASPHAGGA
MRPAGAVQRQ GGADTSPQAR GAFAPSAPAF TTGGSPLLAA RQRAQTALLS LKRFVAARIG
AETPASPSAS MTTTGMDGHA AVAGSGATGA AAPRAVSQTF AGMIAEAEAA YRAAATQYMQ
GSVPGAAEQA TLIQQASVDL RRRSAELKKK APTTADKATV EIVALMFQAI LAEERIPFSA
RVWFARLQMP VLRVAIAEPE FFGTLQHPAR MLIDRMGSCV MGFDAAAISG SALEGEIRRV
VQVIEQYPET GQRVFKLVFD EFVAFLNRYL TQSDATQRVM SVAQQVEQKE TMAIQYTIEL
RKMLNDMPVR EEIREFLFKV WAEVLAIAAL RYGAQGEQTV MLKRVASELV WAASAKPNRA
DRARVIQDLP QLLQRLRLGM NLLGIIDEPQ EAHIKAIGAT LSDAFLSKTE AIPAAKIEAM
AERLAHLEDF VTDDGGASSL PLDATSIELL LGVDAASIEV VADTVGGVPA EDMLAWAHEL
EVGNWFMLDH NDRVSQVQFV WRSDRKQLHL FASADGRSFL IQVGRLANYL QAGLLVPAEE
ETLTVRATRE ALAKLDANPE RLLN
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