| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5085 |
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| Symbol | |
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| ID | 7971456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5397438 |
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| End bp | 5398157 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644795679 |
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| Product | peptidase M22 glycoprotease |
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| Protein accession | YP_002946953 |
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| Protein GI | 239818043 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAGGC TCCTGGCTTT CGACACCAGC ACCGAGCACC TGTCGGTGGC GGTGCGCCAC
GGCGAGCGCC TGTTCACGCA CAGCGGGGCC GGCGGCGCGC AGGCGTCGAG CACGCTGATC
CCGTTCATCC TGCAACTGCT GGCCGAGGCC GGGCTCGAAC TGGCCGCACT CGACGCCATC
GCCTTCGGCC GCGGGCCGGG CTCCTTCACG GGCCTGCGCA CCGCCTGCTC GGTGGCGCAG
GGCCTGGCCT TCGGCGCCGG CGTGCCGCTG CTGCCGGTCG ACACGCTGCT GGCCGTGGCC
GAGGAGGCGC GCCATGCCTT CGGCGCACGC CAGGTGGTGG CGGTGCTCGA CGCGCGCATG
GACCAGCTCT ATGCCGCGCG CTACGACTTC GATGGCGACG GGGCGCTGGG CGGCGCGGAC
GGCGAGCCGC TGCTGCTCGC GCCCGAGGCG CTCGAAGTGC CCGCCGGCTG GTCCCTTGCC
GGCAACGCCT TTGCCGCCTA CGGTCCCCGC CTGGCCCCGG CCGCGGCGCG CCACGAGGTG
CTGCCGACGG CCACTGCGAT GCTGCGGCTG GCGCCCACGC TGCTGGCCGC GGGGCGCACG
GTGGATGCGG CACATGCCTG GCCGCTCTAT GTTCGCGATA AAGTGGCGCA AACCACCGAT
GAGCGCGCCG CCATCAAGGC GGCCGCGCTG GCGGGTCCAC CTGTTGCCAA CCAGTCATGA
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| Protein sequence | MPRLLAFDTS TEHLSVAVRH GERLFTHSGA GGAQASSTLI PFILQLLAEA GLELAALDAI
AFGRGPGSFT GLRTACSVAQ GLAFGAGVPL LPVDTLLAVA EEARHAFGAR QVVAVLDARM
DQLYAARYDF DGDGALGGAD GEPLLLAPEA LEVPAGWSLA GNAFAAYGPR LAPAAARHEV
LPTATAMLRL APTLLAAGRT VDAAHAWPLY VRDKVAQTTD ERAAIKAAAL AGPPVANQS
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