| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5069 |
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| Symbol | |
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| ID | 7974188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5383023 |
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| End bp | 5384069 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795663 |
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| Product | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase |
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| Protein accession | YP_002946937 |
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| Protein GI | 239818027 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.7758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCCT TCACGCTTTC CGATTTCGAT TTCGACCTAC CGCCCGAGCT GGTGGCACAA
CACCCGGCCT CCGAACGCAC CGCCTCCCGT CTGCTCGACG GCACCGGCAG CACCCCGGCC
GACCGCATCT TCAAGAGCCT GCCCTCGCTG CTGCGCGCGG GCGACCTGCT GGTCTTCAAC
GACACGCGCG TGGTCAAGGC GCGCCTGTTC GGCGAGAAGC CGACCGGCGG CAAGCTCGAA
CTGCTGGTCG AGCGCGTGCT GCAGGGCCAC GAGGTCGTGG CGCACATGAA GGTCAGCAAG
AAGCCGCCCG TGGGCACCAC GCTGCAGATG GTCGGCGGCT TTCGCGCCAC GCTGCTGGGC
CGTTGGCCCG AGGAAGACGG CGCGCTGTTC CGCTTCGGCT TCGAGAGCGG CGCCGGCGAA
GACCCCTACG CGTTGATGGC CCGCTGCGGG CATGTGCCGC TGCCGCCCTA CATCATGCAC
AGCGATTCGG CCGACGACGA GCGCCGCTAC CAGACCGTGT TCGCGCGCGT GCCCGGCGCC
GTGGCCGCGC CGACGGCCGC GCTGCATTTC GACGAAGCGC TGCTGGCCGA GCTCGAAACG
CGCGGCGTGC AGCGCGCCAG CGTCACGCTG CACGTGGGCG CCGGCACCTT CCAGCCGGTC
AAGACCGAGA ACATTGCAGA GCACACGATG CATGCCGAGC GCTACGAAGT GCCCGAGGCC
ACGCAGCGCG CGATTGCCGA CTGCAAGGCG CGCGGCGGCC GCGTGGTCGC GGTCGGCACC
ACCACCGTGC GCACGCTCGA ATCGTGGGCC AAGAGCGGCG AGGCCGCGGG CGACACGCGC
ATCTTCATCA CGCCGGGCTT CGTGTTCGAG CATGTCGACC TGCTGGTCAC CAACTTCCAC
TTGCCCAAGA GCACGCTGAT GATGCTGGTC TCGGCCTTTG CAGGCTATGA ACACGTGATG
GCGCTCTATG CCCACGCCAT CGCGCAGCAC TACCGCTTCT TCAGCTACGG CGACGCCATG
CTGCTGGCGC GCGCTGCTCC CGCATGA
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| Protein sequence | MRAFTLSDFD FDLPPELVAQ HPASERTASR LLDGTGSTPA DRIFKSLPSL LRAGDLLVFN
DTRVVKARLF GEKPTGGKLE LLVERVLQGH EVVAHMKVSK KPPVGTTLQM VGGFRATLLG
RWPEEDGALF RFGFESGAGE DPYALMARCG HVPLPPYIMH SDSADDERRY QTVFARVPGA
VAAPTAALHF DEALLAELET RGVQRASVTL HVGAGTFQPV KTENIAEHTM HAERYEVPEA
TQRAIADCKA RGGRVVAVGT TTVRTLESWA KSGEAAGDTR IFITPGFVFE HVDLLVTNFH
LPKSTLMMLV SAFAGYEHVM ALYAHAIAQH YRFFSYGDAM LLARAAPA
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