| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5040 |
|---|
| Symbol | |
|---|
| ID | 7974158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 5361584 |
|---|
| End bp | 5362438 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644795633 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_002946908 |
|---|
| Protein GI | 239817998 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACT ACATCGGCGC GGGCAATCCC ATGCACGCGC AATTCGAGGC CAAGGCGCCT
TACGTGGCGA AGCACTTCGC ATGGCACTAC GAAGCGGGCG TCGGCACCAT CACGCTGAAC
CGCCCCGAGC GCAAGAACCC GCTGACCTTC GATTCGTACG CCGAGCTGCG CGACCTGTTT
CGCGCCTTGA CCTATGCAAC CGACGTGAAG GCCATCGTGG TCACCGGCGC CGGCGGCAAC
TTCTGCTCGG GCGGCGACGT GCACGAGATC ATCGGCCCGC TCACCGGCAT GCGCATGCCC
GAGCTGCTCG AGTTCACGCG CATGACCGGC GACCTGGTCA AGGCCATCCG CCATTGCCCG
CAGCCGATCG TCGGCGCGAT CGACGGCGTG TGCGCCGGTG CCGGCGCGAT GATCGCGCTG
GCCTGCGACC TGCGCTACGG CTCGCCCGCC ACGCGCACCG CCTTCCTGTT CACGCGCGTC
GGGCTTGCCG GCGCCGACAT GGGTGCCTGC GCCTTGCTGC CGCGCGTGAT CGGCCAGGGC
CGCGCCTCGG AACTGCTCTT CACCGGCCGC GCGATGACGG CGCAGGAAGG CCAGGCCTGG
GGCTTCTTCA ATGCGCTGCA CGAAAGCGAT GCGCTGCTCG AAGCGGCCAC CAAGGTGGCG
CGCGAACTGG CCGAAGGCCC GAGCTTCGCG CACGGCATGA CCAAGACCAT GCTCTCGCAG
GAATGGTCGA TGACCATCGA CCAGGCCATC GAGGCCGAGG CACAGGCACA GGCCATCTGC
ATGCAGACCG AGGATTTCAA GCGCGCCTAC GAAGCGTTTG CGGCCAAGCG CAAGCCCGTG
TTCGGCGGAG ACTGA
|
|---|
| Protein sequence | MKHYIGAGNP MHAQFEAKAP YVAKHFAWHY EAGVGTITLN RPERKNPLTF DSYAELRDLF
RALTYATDVK AIVVTGAGGN FCSGGDVHEI IGPLTGMRMP ELLEFTRMTG DLVKAIRHCP
QPIVGAIDGV CAGAGAMIAL ACDLRYGSPA TRTAFLFTRV GLAGADMGAC ALLPRVIGQG
RASELLFTGR AMTAQEGQAW GFFNALHESD ALLEAATKVA RELAEGPSFA HGMTKTMLSQ
EWSMTIDQAI EAEAQAQAIC MQTEDFKRAY EAFAAKRKPV FGGD
|
|---|
| |