| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5034 |
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| Symbol | |
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| ID | 7974152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5354879 |
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| End bp | 5355805 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795627 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946902 |
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| Protein GI | 239817992 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCGC TCAATCACCT CCAGTCCTTT GTGCAGAGCG CCGAAAGCGG CAGCTTCTCG
GCCGCCGCCC GCCGGCTCGG GCTCACGCCG GCCGCGGTCA GCAAGAACGT CGCGCGGCTC
GAAGCGCGGC TGGGCGTGCG GCTGTTCCAG CGCAGCACCC GCCGCCTCAC GCTGACGGAG
GGCGGCGAGC GTTTTCTCGG CCAGATCGGC GGTGCCCTTG CCACGCTGCA GGACGCGGTG
GCCGGCCTCT CGAAGGACGA CGGCCAGCCC GCCGGCACGC TCAAGGTGAG CATGGGCCAG
GCCTTCGGCC GCGAGCACGT GCTGCCGATG ATGGGCGACT TCCTGGCCCG CTATCCGTCC
ATCCTGCCCG ACTGGCACTT CGACAACCAG CAGGTGGACC TCGTGGGCGA AGGCTTCGAC
GCGGCCATCG GCGGCGGCAT CGAGCTCTCG CCCGGCGTGG TGGCGCGCGA ACTGGCGCGC
ATCCATGTGG TGGCGGTGGC CGCCCCGGCC TACCTGGCAG GCCGCGCACT GCCGACGCAG
CCCGCGGAGC TGGCGCAGCT GGACGCCCTG CTGCGGCGCT CCTCGCCCAC CGGCCGGCTT
CGCAGCTGGA CGCTGCAGCA CGCGGGCGGC GACCAGGCCA CGGTGGAACT GCCGCGGCCG
CGCGCGATCT TCAACGACCC CGAAGCCATT GCGCATGCCG CGCTGATGGG CCTGGGCGTC
GCCATGCTGC CGATGCCCTT CGTCGAACGC GGCCTGCGCA GTGGCGAGCT GGTGCGCCTG
CTGCCCGAGT GGCACTTCGA TGCGGGCGCG GTCTGGCTCT ACTACCCGAG CAAGAAGCTG
CTGCCCGCGA AGACCCGCGT GTTCATCGAC TTCGTGCTCG AGCGCTTTCG CAGCGAGCGT
TTCGCCGAGC GCATGCAGGT GGGATAG
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| Protein sequence | MEPLNHLQSF VQSAESGSFS AAARRLGLTP AAVSKNVARL EARLGVRLFQ RSTRRLTLTE
GGERFLGQIG GALATLQDAV AGLSKDDGQP AGTLKVSMGQ AFGREHVLPM MGDFLARYPS
ILPDWHFDNQ QVDLVGEGFD AAIGGGIELS PGVVARELAR IHVVAVAAPA YLAGRALPTQ
PAELAQLDAL LRRSSPTGRL RSWTLQHAGG DQATVELPRP RAIFNDPEAI AHAALMGLGV
AMLPMPFVER GLRSGELVRL LPEWHFDAGA VWLYYPSKKL LPAKTRVFID FVLERFRSER
FAERMQVG
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