| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5019 |
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| Symbol | |
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| ID | 7974137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5335676 |
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| End bp | 5336956 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644795612 |
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| Product | transcriptional regulator, Fis family |
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| Protein accession | YP_002946887 |
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| Protein GI | 239817977 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTCG AACGGCTGGG CACGGCAACC GCGCCGCGCC AACTTTTTTC CAGCACGCCG
GCGCAGCGCG TGGCGCTCGC GCGGCAGCAG TTCTTCGAGG AAGGCGTGCG GCCATCGGGC
CTGGTCGGCG AGGCGGTGAT CCAGTCGTGG CTGCGCTGCA CCCGCAACCA CAGCGACCGG
CAGCGCATCG TGCCTTTCGA TGCGGTCACG CCGAGCCGCC TGCACGCCAC GCTGGCGCGC
AACCGCGAAC TGCTCGAGGT GGCGCGGCAG GAACTCGCGA GCATGGAAAG CGCGCTCGCG
GGCACCGACT GCCGCGTGAT CCTGACCGAC GGCGAAGGCG TGGTGGTGCA CGTCACGCAC
CAGCCGGCCG CCGCGCACCA GCCGGTGCTG CGCAAGACCG CGCGCGTGGG CGTGAACATT
TCCGAGCGCA TCGTCGGCAC CACCGCGCCG GGCATCGTGG CGACCACCGG GCTGGCCTGC
ACGGTCGACG GCGCGGAGCA CTACTTCGAC GTGCTGTCGC AGATGCAGTG CGCCGCGGCG
CCGATCCGCG ACGTGGCGGG CCGGCTCGCG GGCGTGCTCG ACATCACGAT GGAGGCGCGG
CGCTTCGGCT TCGATGCAGC CTCGATGGTG GGGCTCTACG CCACGACCAT CGAGAACCGC
CTGCTGCAGG CGCAGTCGCG CGACCACCTG ATCCTGCGCT TCCAGGCCAG CCCCACGCTG
CTGGGCACGC CGATGGAAGC GCTGGCCGGC GTGGCGCCCG ACGGCACCAT CGCCTGGCTC
AACGGTGCCG GCGCGCGGCT GATCGGCCGC CTGCCCGAAG AGGCCTGCGA ACGCGATGTC
GAATCGATGC TGGGCCACGA CCTCGCGAGC CTGCTGCGGC TCGAAAGGCG CGAAGCCGCG
CAGCCGCTGC GCCTGGCGAG CGGCCTGGGC GTGTGGGTGC AGGCGCGCCT GAAGGCTGCG
GACGGCGTGG ACTTCAGGCA TGCGGTGGCG ATGCCCGGCG AAAACGGCGC GGTGTTGTCC
GCCGAGCCCG CGGCGGCGGC CCAGCCGTTG GCGGCGCACG AGCACACGCC AGCCATCGCC
TCCCACCACG TGCCGGTGGA AGCGCTGCAG GGCGAAACCC TGCGCGAGCA CAGCCGCAAG
CTGATCGAGG ACACGCTGGC GGCGCAGGGC GGCAACGTCT CGCAGGCGGC GCGGCAGTTG
GGCGTGTCGC GCGGCACGCT GTACCGGCGG CTGCGCGGCT GGCGCGAAGA GGACAAGGTC
GCGCCGCGCG CGCCGGACTA G
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| Protein sequence | MAFERLGTAT APRQLFSSTP AQRVALARQQ FFEEGVRPSG LVGEAVIQSW LRCTRNHSDR
QRIVPFDAVT PSRLHATLAR NRELLEVARQ ELASMESALA GTDCRVILTD GEGVVVHVTH
QPAAAHQPVL RKTARVGVNI SERIVGTTAP GIVATTGLAC TVDGAEHYFD VLSQMQCAAA
PIRDVAGRLA GVLDITMEAR RFGFDAASMV GLYATTIENR LLQAQSRDHL ILRFQASPTL
LGTPMEALAG VAPDGTIAWL NGAGARLIGR LPEEACERDV ESMLGHDLAS LLRLERREAA
QPLRLASGLG VWVQARLKAA DGVDFRHAVA MPGENGAVLS AEPAAAAQPL AAHEHTPAIA
SHHVPVEALQ GETLREHSRK LIEDTLAAQG GNVSQAARQL GVSRGTLYRR LRGWREEDKV
APRAPD
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