| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4976 |
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| Symbol | |
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| ID | 7974258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5287602 |
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| End bp | 5289638 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795571 |
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| Product | heat shock protein 90 |
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| Protein accession | YP_002946846 |
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| Protein GI | 239817936 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0326] Molecular chaperone, HSP90 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.144438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATT CTTCCAATAC GAAACTCCCG TTCCAGGCTG AAGTCGCGCA GCTGCTGCAC
CTTGTCACGC ATGCGCTCTA CTCGAACAAG GAAATCTTCC TGCGCGAGCT GATCTCGAAC
GCATCGGACG CCTGCGACAA GCTGCGCTTC GAGGCGCTCG ACCACCCCGA GCTGTATGAA
GACCAGACCG AGCTGGACGT GCGCCTTTCC TTCGACAAGG CCGCGCGCAC CATCACCATC
ACCGACAAGG GCATCGGCCT GTCGCGCCAG GAGGCCATCG AGAACCTCGG CACCATCGCC
AAAAGTGGTA CCAAGGACTT CGTGAGCAAG CTCAGCGGCG ACCAGAAGGC CGACGCCCAG
CTGATCGGCC AGTTTGGCGT GGGCTTCTAT TCGGGCTTCA TCGTGGCCGA CAAGATCACG
GTCGAATCGC GCCGCGCGGG CCTGCCGCCC GAGCAGGGCG TACGCTGGAC GAGCGGCGGC
GCGGGCGACT TCGAGGTGGC CGACATCACG CGCCCCGAGC GCGGCACCCG CATCACGCTG
CACCTGCGCG ACGACGCCGA CGAATACCTC AACGCCTGGA AGCTCAAGCA GATCGTCGGC
AAATATTCCG ACCACATCTC GCTGCCCATC CTCATGGAAA AGGAGGAGTG GAAGGAAGGC
GAGAACGACC AGCCCGGCGA CATGGTCAAG ACCGGCGAAT GGGAAACGGT CAACAAGGCC
AGCGCGCTCT GGAGCCGCCC CAAGAAGGAC ATCACGCCCG AGCAGTACGA AGAGTTCTAC
AAGACCATCA GCCACGACTA CGAGGCGCCG CTCGCCTGGA GCCACAACCG CGTGGAAGGC
AGCACCGAGT ACACGCAGCT GCTCTACATC CCTTCGAAGG CGCCGTTCGA CCTGTGGAAC
CGCGACAAGA GCGCGGGCGT CAAGCTCTAC GTGAAGCGCG TCTTCATCAT GGATGACGCC
GAGGCGCTGC TGCCCAGCTA CCTGCGCTTC GTGAAGGGCG TGATCGATTC GTCCGACCTG
CCGCTCAACG TGAGCCGCGA GCTGCTGCAG GAAAGCCGCG ACGTGAAGGC CATCCGCGAA
GGCAGCACCA AGCGCGTGCT CGGCATGCTC GAGGACCTGG CCAGGAAGCA GAAGACCGGG
CCGGAAAGCG GCGAAGGCAA GATCGACGTG GGTTCGGGCG AATCGGTGCC GGCCCCCGAG
CCGACCGAGG CCGTGACCGA CGTGGTCGAC AAGAACGCCC CCACGGCCGC CGAAGCCGCC
GCGGCCGCCG CCGACGAATC GGGCAAGTAC GCCAAGTTCT ATGCCGAGTT CGGCGCCGTG
CTCAAGGAAG GCCTGGGGGA GGACTTCGGC AACCGCGACC GCATCGCCAA GCTGCTGCGC
TTCGCCTCCA CCACGAGCGA CACCGTGAGC GTGAGCTTTG CCGACTACAA GGCGCGCATG
AAGGAAGGCC AGGACGCGAT CTACTACATC ACGGCCGACA CGCTCGCCGC CGCCAAGAAC
AGCCCCCAGC TCGAAGTCTT CAAGAAGAAG GGCATCGAGG TGCTGCTGAT GACCGACCGC
GTCGACGAGT GGGCGCTCAA CTACCTCACC GAGTTCGACG GCACGCCGCT GCAGAGCGTG
GCCAAGGGCG CGGTCGACCT CGGCAAGCTG CAGGACGAGG CCGAGAAAAA AGCCGCCGAG
GAAGCCGCCG AATCCTTCAA GCCGCTGCTC GAGAAGCTCA AGGAAGCGCT CAAGGACAAG
GCCGAGGACG TGCGCGTGAC CACGCGCCTG GTCGATTCGC CGGCCTGCCT GGTGGTGCAG
GACGGCGGCA TGAGCACGCA GCTCGCGCGC ATGCTCAAGC AGGCCGGCCA GCCCGCGCCC
GACCTCAAGC CCGTGCTCGA AGTGAACGCC GAACACGCGC TCGTGAAGAA GCTCGACGGC
TCCGAGCATT TCGACGATCT TGCGAACATT CTTTTCGACC AGGCGCTGCT GGCCGAAGGC
GGCCTGCCGG CCGATCCCGC GGCCTACGTG AGGCGCGTCA ACGCGCTCTT GGTGTGA
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| Protein sequence | MADSSNTKLP FQAEVAQLLH LVTHALYSNK EIFLRELISN ASDACDKLRF EALDHPELYE
DQTELDVRLS FDKAARTITI TDKGIGLSRQ EAIENLGTIA KSGTKDFVSK LSGDQKADAQ
LIGQFGVGFY SGFIVADKIT VESRRAGLPP EQGVRWTSGG AGDFEVADIT RPERGTRITL
HLRDDADEYL NAWKLKQIVG KYSDHISLPI LMEKEEWKEG ENDQPGDMVK TGEWETVNKA
SALWSRPKKD ITPEQYEEFY KTISHDYEAP LAWSHNRVEG STEYTQLLYI PSKAPFDLWN
RDKSAGVKLY VKRVFIMDDA EALLPSYLRF VKGVIDSSDL PLNVSRELLQ ESRDVKAIRE
GSTKRVLGML EDLARKQKTG PESGEGKIDV GSGESVPAPE PTEAVTDVVD KNAPTAAEAA
AAAADESGKY AKFYAEFGAV LKEGLGEDFG NRDRIAKLLR FASTTSDTVS VSFADYKARM
KEGQDAIYYI TADTLAAAKN SPQLEVFKKK GIEVLLMTDR VDEWALNYLT EFDGTPLQSV
AKGAVDLGKL QDEAEKKAAE EAAESFKPLL EKLKEALKDK AEDVRVTTRL VDSPACLVVQ
DGGMSTQLAR MLKQAGQPAP DLKPVLEVNA EHALVKKLDG SEHFDDLANI LFDQALLAEG
GLPADPAAYV RRVNALLV
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