| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4953 |
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| Symbol | |
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| ID | 7974235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5261748 |
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| End bp | 5263811 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795548 |
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| Product | pyruvate phosphate dikinase PEP/pyruvate-binding |
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| Protein accession | YP_002946823 |
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| Protein GI | 239817913 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.717786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA ACAAGAACGC CTGTGCACCG GGCGAACCGC GCTACCCAAA CCATAGCGCG
GCGCGATGGA TGGCAGTGCT CGTGTGCGCC GCGCTGACCA TTGCCGCCGT GCCCACGCAC
GCGCAGCTTG CGCGCAAGCC TTCCTACTAC CAGCAGCAGA ACAGCAACAC GTCCGCCCCC
GAAGGCGCGC AGCTTCCCGC GCGGCCGGCC GCGCCCGCGT CGCTGCCGGT GCTGCGCAGC
CGCGGCGACT TCGACACGCT GGCCCGCGTC TACGACGCCG GCACGCCGAT GCAGCTGGCC
CACGTGCTGT TTGCCGTCGA CCGCCGGGCC CGGCCTGTGC GCACCTACTA CATCGACACG
CCGCGCTACC AGCTGCATGT GCGCTTCGTG CGCGAGACCG GGCTCGCGCC GCGCGCGGGC
AAGCGCGAGA TCGACCGCAA CTACCTCGCG CCGGACCGCC GCTTCCTGTT CGGCACGCTG
AGCTGGCAGC AGAACATCGG CAGCTTCACC TACGAGTTCT GGGAAGGCGA CCGGCTCACT
CCCGCGCTGC TGCGCGAGGC CGATGCACAG GTGAAGGCCA GCTTTTTCGC GCCCGTGAAG
TTCAAGACCA ATTCCACGCT GCATGAACGC GTCGCGAACG AGGCAGGCAT CGAATTCGTC
AGCCAGGAGG CGCTGATCCG CGAGCAGCCC TACATGCCGA TGAACCTGGG CACGGCCACG
GGCCGCGTGC GCATCGTGGA CGAGGCCTCG GGCGCGAATG CGCTGAACGC GCTGCTGCCG
GGCGACATCG CCGTGCTGCG CCAGGTGCCG ATCGGCCTGC CGCCCGTGGC CGGCGTGCTG
ACCGAGCGGC CGTCCACGGC GCTCTCGCAC GTCAACCTGC TGGCCAAGGG CTGGGGCATT
CCCAACGCCT ATGTGCGCGA TGCCGCGGCC GTGCTGCGCG AGCACGCAGG GCAGTGGGTG
GCGCTCAAGG TGGCGGCCTC GGGCTACCAG GTGCGCCGCC TCACGGCGGA AGAGATTGCC
GCGCTGCCGC CGCGCGCAGC ACGTGCCGCG GCCACCGGCG CACTGCCAGG CAGCGGCAAG
GCCGCGAAGC CGGACCTGCG TGAAACCCGC CTGCTGCCGC TCGCGTCATT GCGCGCCCGC
AACAGCGCGC AGTGCGGCGC CAAGGCCGCC AACCTCGGCG CCGTGCTGGC CGCGCGCATT
CCAGGCACGA CCGTGCCCGA CGGCTTCTGC ATTCCCTTTG CGCACTACGA CCGCTTCATG
CACGCGAACG GACTGGCCGA GCGCATCGCA CGAATGCAGC AGCAGCCCGG CTTCGCGAGC
GATCCGCAGG TCCGGCAGAA GGCGCTGGCG CAGTTGCAGG GCGAGATCGT GCAGTGGCCC
GTCGATGCGG CCGATGCGGC GGCGTGGCGC GCCGCATGGC AGGCGCAGCT CGGCGGTGGC
GGCGTGTTCG TGCGCAGCTC GTCTAACTCG GAAGACCTGC CGGGCTTCAG CGGCGCGGGG
CTCTACACCA CGGTGCCCAA CGTCAAGACC GGCGACGCGC TCGAACTCGC GGTGAAGAAG
GTCTGGGCCT CAGTCTTCAA CCCCGAGGCC TGGGAGGCGC GCAGCGCCGC GGGCTTCGGC
GCCGAGTCGG TGCTGATGGG CGTGTTCGTG CAGACGGCCA TCGATGCCAC CAGCGCCGGC
GTGATGATCA CGCGCGACCC CTTCGACGCC GGCCACCCGC ACGCCACCTA CATCTCGGCC
AAGCGCGGCA TCGGCATCCG CGTGGTGGAG GGGCGGCGCG TGGCCGAGCA GGTGATGTAC
TCGAGCTGGT CCAAGGCGGT CCAGGTGCTG AGCCGCTCGG CCGAAGAAAC CGCGCTGCAG
CTGGACAAGG ACGGCGGCGT GAAGGAAGTA CCGGTGGAGG CCGGCCGCCA CGTGCTGACC
GACGATCTGG TGGTGCGGCT GGCCACCGTG GGGGCGGCCG TGAAGCGTGC GTTCAACGGC
GTCGACCAGG ACATCGAATG GGCCACCGTG GGCGAGCGCA TCGTGCTGCT GCAGGCGCGG
CCGTACGTGG AGCGGCGGCG CTGA
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| Protein sequence | MKNNKNACAP GEPRYPNHSA ARWMAVLVCA ALTIAAVPTH AQLARKPSYY QQQNSNTSAP
EGAQLPARPA APASLPVLRS RGDFDTLARV YDAGTPMQLA HVLFAVDRRA RPVRTYYIDT
PRYQLHVRFV RETGLAPRAG KREIDRNYLA PDRRFLFGTL SWQQNIGSFT YEFWEGDRLT
PALLREADAQ VKASFFAPVK FKTNSTLHER VANEAGIEFV SQEALIREQP YMPMNLGTAT
GRVRIVDEAS GANALNALLP GDIAVLRQVP IGLPPVAGVL TERPSTALSH VNLLAKGWGI
PNAYVRDAAA VLREHAGQWV ALKVAASGYQ VRRLTAEEIA ALPPRAARAA ATGALPGSGK
AAKPDLRETR LLPLASLRAR NSAQCGAKAA NLGAVLAARI PGTTVPDGFC IPFAHYDRFM
HANGLAERIA RMQQQPGFAS DPQVRQKALA QLQGEIVQWP VDAADAAAWR AAWQAQLGGG
GVFVRSSSNS EDLPGFSGAG LYTTVPNVKT GDALELAVKK VWASVFNPEA WEARSAAGFG
AESVLMGVFV QTAIDATSAG VMITRDPFDA GHPHATYISA KRGIGIRVVE GRRVAEQVMY
SSWSKAVQVL SRSAEETALQ LDKDGGVKEV PVEAGRHVLT DDLVVRLATV GAAVKRAFNG
VDQDIEWATV GERIVLLQAR PYVERRR
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