| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4920 |
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| Symbol | |
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| ID | 7971614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5229892 |
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| End bp | 5230269 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644795515 |
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| Product | ribosomal protein S12 |
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| Protein accession | YP_002946790 |
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| Protein GI | 239817880 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.11555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACCA TCAATCAACT GGTGCGTCAG GGTCGAACGG TCGAAAAGAT CAATTCGAAG
AGCCCTGCCA TGCAGAACTC GCCGCAACGC CGCGGTGTCT GCACCCGCGT CTACACCACG
ACGCCCAAGA AGCCCAACTC GGCGCTTCGT AAAGTTGCCA AGGTCCGCCT GACCAACGGC
TTCGAAGTCA TCTCCTACAT CGGCGGCGAA GGCCACAACC TGCAGGAACA CAGCGTCGTG
CTGGTTCGCG GCGGTCGTGT CAAGGACTTG CCCGGTGTTC GCTACCACAT CGTGCGCGGT
TCGCTCGACC TGCAAGGCGT GAAAGACCGC AAGCAGTCGC GTTCCAAGTA CGGCGCGAAG
CGTCCCAAGA AGGCTTAA
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| Protein sequence | MPTINQLVRQ GRTVEKINSK SPAMQNSPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVISYIGGE GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQSRSKYGAK
RPKKA
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