Gene Vapar_4862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4862 
Symbol 
ID7971556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp5180987 
End bp5181694 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content69% 
IMG OID644795457 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_002946732 
Protein GI239817822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCTT CTTCTTCCGA GCATCCGCCG CCTTCGAACC CGCAGCCCTG GCTTCGCGCC 
CTGGGCCGGC GGTGCCGCGC GCTCTGGCCG CTGAAGCTGG TCGGCAACAC GGTCGCGACC 
GCGGGTTTCT TCCCGCTGTA TTTCTGGATC ATGAAGAACG CCGGCCCGCC CTGGACGCTG 
CCGCTCACCG CGTTCGACCG GCTGATCGCC TTCTGGCCGA CGCTGCTGCC GGTCTATCTT 
TCGCTGTGGC TCTACATCGC GCTGCCGGTG TTCCTTGCCA AGGACAGGCG GGAACTCTGG 
AGCTTTGCGC TGGGCTGCGC CTTCATGACG GGCATCGCGC TCGTGGTGTT CTGGTTCGTG 
CCGACCGCCA TCCCGAACTT CAGCATCGAC ACCCGCCCGG GCACCTCGCT GCATCTGCTG 
AAAACCGTGG ATGCGGCCGG CAACGCGTTT CCGTCGCTGC ATGTGTCGTT CTCGGTGTTT 
GCCTGCGTGG TGCTCGCGCG GCAGCTGCGC GAGGTGGCGG CACCCGCATG GGCTCGCGCG 
CTCAACATCG CGTGGGCCGT GGCCATCGTC TATTCGACGA TGGCGGTGCG CCAGCACGTG 
CTGGTCGACG TGCTCGGCGG GCTGGCGCTG GGCATCGGCT TCGGGCTGGC CTCGCGTCCC 
CGCAAGGCCG TGGCGGCGGC AGCGGCCGTG CAGGCACGGC CGGCGTAG
 
Protein sequence
MTPSSSEHPP PSNPQPWLRA LGRRCRALWP LKLVGNTVAT AGFFPLYFWI MKNAGPPWTL 
PLTAFDRLIA FWPTLLPVYL SLWLYIALPV FLAKDRRELW SFALGCAFMT GIALVVFWFV 
PTAIPNFSID TRPGTSLHLL KTVDAAGNAF PSLHVSFSVF ACVVLARQLR EVAAPAWARA 
LNIAWAVAIV YSTMAVRQHV LVDVLGGLAL GIGFGLASRP RKAVAAAAAV QARPA