| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4843 |
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| Symbol | |
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| ID | 7971537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5161449 |
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| End bp | 5161991 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795438 |
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| Product | flavin reductase domain protein FMN-binding |
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| Protein accession | YP_002946713 |
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| Protein GI | 239817803 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
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| TIGRFAM ID | [TIGR03615] pyrimidine utilization flavin reductase protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCCA ACGCAATGGC CTCCAACCAC GTCATGCCGA GCGGTGCGCC GCCTGTGCTG
CCCAAGGCCG ACTACCGCAA CGCCATGGCG CGGCTGGGTG CGGCGGTCAA CATCATCACC
ACCGACGGGC CCGCAGGCCG CGCCGGGTTC ACCGCCTCGG CCGTGTGCAG CGTGACCGAC
GAGCCGCCGA TGCTGCTGGT GTGCCTGAAC CGCTCGGCCT CGGTGTACCC CGCGTTCACG
GCCAACGGCG TGCTGTGCGT GAACGTGCTG GCCGCGGGGC ACCAGGCGCT CTCGGGCCTG
TTCGGCGGCA AGACGCCGAT GGACGAGCGC TTTGCCGCAG GCCGATGGAG CCGCAAGGCC
ACGGGCTCGC CGGTGCTCGA AGATGCCGCG GCCTCGTTCG ACTGCCGCGT GGTGCAGGCC
ACGAGTGCGG GGACGCATGA CGTGCTGTTT TGCGAGGCGT TGGCGATTGC GATTGGGGGG
GCGGCGCAGA GCTTGATTTA TTTCGATCGG CGGTATCACG AGATTGCAGC GCCGCCGCAC
TGA
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| Protein sequence | MLPNAMASNH VMPSGAPPVL PKADYRNAMA RLGAAVNIIT TDGPAGRAGF TASAVCSVTD
EPPMLLVCLN RSASVYPAFT ANGVLCVNVL AAGHQALSGL FGGKTPMDER FAAGRWSRKA
TGSPVLEDAA ASFDCRVVQA TSAGTHDVLF CEALAIAIGG AAQSLIYFDR RYHEIAAPPH
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