| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4841 |
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| Symbol | |
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| ID | 7970312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5160021 |
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| End bp | 5160821 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795436 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002946711 |
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| Protein GI | 239817801 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR03611] pyrimidine utilization protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGC ACTACGAAGT GCATGGGCCG GCCGATGGCG AGGCGGTGCT GCTGTCGTCG
GGCCTGGGCG GTTCGGCCGC CTTCTGGCAA CCGCAGCTTG GCGCGCTGCT CGAAGCGGGC
CACCGCGTGA TTGCGTACGA CCAGCGCGGC ACGGGCCGCA GCCCCGCCGC GCTGGATGCG
GGCTATGCCA TTGCCGACAT GGCGCGCGAC GTGGTGCAGA TTCTCGACGC CACGGCCACG
CCGCGCTGCC ACCTGGTGGG CCATGCGCTG GGCGGGCTCG TGGGCCTGCA GCTGGCGCTC
GACGAACCGG CGCGCGTGGC CAGCCTGGTG CTGGTCAATG CGTGGTCGAA GCCCAACGCG
CATTCGGCGC GCTGCTTCGA TGCGCGGCTC GCGCTGCTCG ATGCCTGCGG CCCGCGTGCG
TACGTGGAAG CGCAGCCGAT CTTTTTGTAC CCCGCGGCCT GGTGCGCGGA ACATGCGCAG
CGCGTGGCCG ACGAGGTCGA CCATGCGTTT GCGCATTTCC CCGGAGAAGC CAACATGCGC
GCGCGCATCG GCGCGCTGCG CGCCTTCGAC ATCGATGCAC GCCTGGGCGC CATCACCGCG
CCCACCTTGG TGGCCGCCGC CATGGACGAT GCGCTGGTGC CTTGGACCTG CTCACAGCGC
CTGGCCGATG GCCTCAAGGA CGTGACGCTC CACTTCCTGC CGCACGGCGG CCACGCGCAC
AGCGTGACCG AGGCCGCCGT CTTCAACCGC AGCCTGCTCG ACTTTCTCGC CCGGGTCAGC
GCACCCGGCG TTCCCGCATG A
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| Protein sequence | MPLHYEVHGP ADGEAVLLSS GLGGSAAFWQ PQLGALLEAG HRVIAYDQRG TGRSPAALDA
GYAIADMARD VVQILDATAT PRCHLVGHAL GGLVGLQLAL DEPARVASLV LVNAWSKPNA
HSARCFDARL ALLDACGPRA YVEAQPIFLY PAAWCAEHAQ RVADEVDHAF AHFPGEANMR
ARIGALRAFD IDARLGAITA PTLVAAAMDD ALVPWTCSQR LADGLKDVTL HFLPHGGHAH
SVTEAAVFNR SLLDFLARVS APGVPA
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