| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4788 |
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| Symbol | |
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| ID | 7970258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5100242 |
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| End bp | 5101576 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795383 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_002946659 |
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| Protein GI | 239817749 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.359193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTATC AGGACTTCAA CATGGGCAAC CAGTGGTTGC CCTTCACTCC CAACCGCCAC
TTCCAGAAAG ACCCTCGTGT TTTCGTGGCC GCCGACGGCA TGGAGTTCAC CACGCACGAC
GGCAAGAAGG TGATCGACGG TATCTCGTCG CTCTGGTGCG TGGGCGCGGG CCACAACCGC
AAGCCCATCA ACGAGGCGAT CAAGAAGCAG CTCGACACGC TGGACTACGC CACCGCCTTC
CAGGTCAGCA ACGACAAGGC CTTCAAGGCG GCCGAGATGA TCGCCTCGCT GGCGCCCGGC
GACCTCAACA AGGTGCTGTT CTGCAATTCG GGCTCCGAGG CGGCCGACAC CTCGATGAAG
GTGGCGCTGG CCTACCACCG CGCGCGCGGC GAAGGCCACC GCAACGTGTT CATCGGCCGC
GAGAAGGGCT ACCACGGCGT GGGCTTCGGC GGCATGTCGG TGGGGGGCAT CCCGGGCAAC
CGCAAGGTGT TCGGCGCGGC CTTTTTGCCG CGCGTGGACC ACATGCGCTT CATCCACGAT
CCGGTGAACC ATGCCTACAT CCACAACGAG GAGCCGGTGT GGGCCGAAGA CCCGCTGGTC
GAGCTCGAAA CGCGCATCCT GCCGCTGCAC GATCCGAGCA ACATCGCCGC GATCATCGTG
GAGCCGGTGG CCGGTTCGGC CGGCTGGTAC CTGCCGCCCA AGGGCTACCT GAAGCGCCTG
CGCGAGATCT GCGACAGGCA CGGCATCCTC TTGATCTTCG ACGAGGTCAT CACCGGCTTC
GGCCGCATGG GCACCAACTT CGCGTCGGAC TATTTCGGCG TGGTGCCCGA CATGCTGAAC
TTTGCCAAGT GCGTGACCAA CGGCGTGATT CCGCTGGGCG GCGTGATCTG CCGCGACAAG
CTCTACGACG CGATGATGAA GACCGACGCG CCAGAGCACG TGGTCGAGTT CTTCCATGGC
TACACCTACT CGGGCCATCC GGTGGCCTGC GCCGCCGCCA TTGCCACGCT CGACCTGTTC
AAGGAAGAAA ACCTGTTCGC GCGCGCCGGC GAAATGGGCA AGGTGCTGGG CGATGCCTTC
CACAGCGCCT TCAAGGGCCT GCCGAACGTG GTCAGCATCC GCAGCCTCGG CCTGGCCGCC
GCGGTGGAGC TCGCGCCCAT CGCGGGCGCG CCGGGCAAGC GCGCCTACGA CATCTTCCTG
GACTGCTTCC ACAAGGGCGC GCTGGTGCGG CCCGCGGGCG ACGTGCTGGT GATTGCGCCG
CCCTACATCG TGGAGAAGCA GCACATCGAG ACGCTGGTCA ACACGCTGGC GGATTCGATC
AGGAAGTTCG CCTGA
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| Protein sequence | MAYQDFNMGN QWLPFTPNRH FQKDPRVFVA ADGMEFTTHD GKKVIDGISS LWCVGAGHNR
KPINEAIKKQ LDTLDYATAF QVSNDKAFKA AEMIASLAPG DLNKVLFCNS GSEAADTSMK
VALAYHRARG EGHRNVFIGR EKGYHGVGFG GMSVGGIPGN RKVFGAAFLP RVDHMRFIHD
PVNHAYIHNE EPVWAEDPLV ELETRILPLH DPSNIAAIIV EPVAGSAGWY LPPKGYLKRL
REICDRHGIL LIFDEVITGF GRMGTNFASD YFGVVPDMLN FAKCVTNGVI PLGGVICRDK
LYDAMMKTDA PEHVVEFFHG YTYSGHPVAC AAAIATLDLF KEENLFARAG EMGKVLGDAF
HSAFKGLPNV VSIRSLGLAA AVELAPIAGA PGKRAYDIFL DCFHKGALVR PAGDVLVIAP
PYIVEKQHIE TLVNTLADSI RKFA
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