| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4760 |
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| Symbol | |
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| ID | 7971770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5057509 |
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| End bp | 5058312 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795345 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002946631 |
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| Protein GI | 239817721 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.318809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCC CGCCCCTCCT GAGCCAGCCG CGCGTGCAGC GCGTGCTCTA TCCCCTGCTC
ATCGGCGTGG TGCTGGTCGC GCTGTGGCAA TGGATGGTGG TCGCCATGGA GCTGCCGCCC
TACCTGGTGC CCTCGCCCTT CCTCATGGTG CAGACGCTCG TGACCGACTG GGCGCCGCTC
GGCAGCGCGC TCCTGGTCAC GCTCAAGATC ACGCTGCTGT CGTTCCTGCT GGCCACCGTC
GCCGGGGTGC TGATCTCGTT CCTGTTCGTG CAGAGCAAGC GCATCGAGAC CGCGCTCTTT
CCGTATGCGG TGCTGCTGCA GGTGACGCCC ATCGTGGCGG TGGCGCCGCT CATCATCATC
TGGGTGAAGA ACCCGGTGGC GGCCATGACG GTGTGCGCCG CGCTGGTGGC GCTGTTCCCG
ATCATCAGCA ACACCACGCT CGGCCTGCGC AGCATCGACC CCGACCTGCA GAGCTACTTC
AAGCTCAACC GCGCGACGCG CTGGCAGCAG CTGGTGCGGC TGCGCATTCC GAGCGCGCTG
CCGTACTTCT TTGGCGGGCT GCGCATCTCG AGCGGCCTGG CGCTGATCGG CGCGGTGGTG
GCCGAGTTCG TGGCCGGCAC CGGTGGCTCG GGCGCGGGCC TGGCCTACCA GATCCTCCAG
GCCGGCTTCC AGCTGAACAT CCCGCGCATG TTCGCGGCCC TGCTCCTGAT CTCGCTGACC
GGCGTCGCGC TCTTCGTGCT GATGGCCTGG CTCACCAAGC TGGCGCTGGG CTCGTGGCAC
GCGAGCGAAC TTTCCCAGGA TTGA
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| Protein sequence | MKSPPLLSQP RVQRVLYPLL IGVVLVALWQ WMVVAMELPP YLVPSPFLMV QTLVTDWAPL
GSALLVTLKI TLLSFLLATV AGVLISFLFV QSKRIETALF PYAVLLQVTP IVAVAPLIII
WVKNPVAAMT VCAALVALFP IISNTTLGLR SIDPDLQSYF KLNRATRWQQ LVRLRIPSAL
PYFFGGLRIS SGLALIGAVV AEFVAGTGGS GAGLAYQILQ AGFQLNIPRM FAALLLISLT
GVALFVLMAW LTKLALGSWH ASELSQD
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