| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4752 |
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| Symbol | |
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| ID | 7971762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5050129 |
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| End bp | 5051073 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795337 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946623 |
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| Protein GI | 239817713 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACTC TCTCCTCTCC CGCCGCCGAC CGCATCGAAC TGATGCAGAC CTTCGTCCAT
ATCGTCGAGG CCGGCAGCCT TTCGGCCGCC GCGCTCCAGA TGGGCGCGAC GCAGCCCACC
GTGAGCCGCC GCCTGCAGGC GCTGGAGCGC TCGCTGGGCG TGCGGCTCCT GCGCCGGTCC
ACGCACGCCA TGAAGCTCAC CGAGGATGGC GAGCGCTGCT ACGAGCGCGC CCGGGAGCTG
CTCGCCGACT GGCACGCCTT CGAGGCCGAC CTGCGCGGCG TGGGCGACGA GCCCGAAGGC
ACGCTGCGCG TGGTGGCGCC GCATGCGCTG GGCCAGCTGC TGCTGGTCGG TCCGCTGGCC
GACTACCTCC GGGCCTATCC GCGCGTGTCG GTCGAATGGC TGCTGAACGA CCGCCGGCCC
GACTTCATCG CCGAAGGCGT CGACTGCGCG ATCCAGGTCG GCGAGGTGAC CGACACCCTG
GCGGTGGCGC TCAAGCTCTC GGAAGTGCCG CGCGTGGTGG TCGCCGCGCC CTCGGTGCTG
GCTGGGCGCG CGCCGCCCGC GCATCCGTCG GAGCTGGCCG AACTGCCGTG GCTCGCGCTG
CGCACCTTCT ATCGCAATGA GGTGCTGCTC ACGCACCGCC CGAGCGGCGA GGTCGCGCGC
GTGCCGATCC GCCCGCGCAT GAGCACCGAC AGCCTCTATG CGCTGCAAAG CGCGGCGCGC
ATGGGCCTGG GTGCCTGCAT GGCCTCGGCC TGGCTGGTGA ACGAGGACAT TGCCGCCGGC
CGGCTGGTGC AGCTGGTGCC GCAATGGCAT GTGGCGCCGC TGCCGGTGTA CCTGATCTAT
CCGCCGTCGC GCTTCCAGCC GGCGCGCCTG CGCCGCTTCA TCGAGACCAT GCGGCTCGCG
CTGGCCGATC CGGCAGGCCG CACCTGGGAG GCGGACGCGG CCTGA
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| Protein sequence | MSTLSSPAAD RIELMQTFVH IVEAGSLSAA ALQMGATQPT VSRRLQALER SLGVRLLRRS
THAMKLTEDG ERCYERAREL LADWHAFEAD LRGVGDEPEG TLRVVAPHAL GQLLLVGPLA
DYLRAYPRVS VEWLLNDRRP DFIAEGVDCA IQVGEVTDTL AVALKLSEVP RVVVAAPSVL
AGRAPPAHPS ELAELPWLAL RTFYRNEVLL THRPSGEVAR VPIRPRMSTD SLYALQSAAR
MGLGACMASA WLVNEDIAAG RLVQLVPQWH VAPLPVYLIY PPSRFQPARL RRFIETMRLA
LADPAGRTWE ADAA
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