| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4745 |
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| Symbol | |
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| ID | 7971755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5043758 |
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| End bp | 5044723 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795330 |
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| Product | diacylglycerol kinase catalytic region |
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| Protein accession | YP_002946616 |
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| Protein GI | 239817706 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCGT CTCCCCTCGG TCCGAACTCC CCCTTGTTCG TCGTTCTCAA CGCCGGTTCC
GGCAGCGCGG ACGCCGCCGA AACCCGTGAA ATCATCGAGC AAGGCTGCGC CGCGGCCGGC
CGCAGGCTGC GCATCTTCCT GGTCGACGAA CGCACGACGG TGCAGGCGCT GGCGCGCGAG
GCGGTGGAGC GCGCCCGCGC CGTGGACGGC GTGGTGGTGG CCGCGGGCGG CGACGGCACC
CTCAACACGG TGGCGCGGGC CACGCTCGGC AGCGGGCTGG CCTTCGGCGT GCTGCCGCAA
GGCACCTTCA ACTATTTCAG CCGCGCCCAC GGCATTCCGC GCGACACGGC GCAGGCGCTG
CAGGTGCTGC TGGACGAGCA GCCGCGGCCG GTGCAGGTGG GGCTGGTCAA CGACCGCATC
TTCCTGGTGA ATGCCAGCAT GGGCCTGTAT GCCGAACTGC TGGAGGAACG CGAAAGCTAC
AAGGTGCGCT ACGGCCGCAG CCGCTGGGTC GCTTTTTTTG CCGGCCTGCT CACCGTGATG
CGTGGCCACC GGCACTGGAA CCTGCGCATC GCCTCGCACG GGGTGGAGCG CGACATCCGC
ACGACCACGC TTTTCGTGGG CAACAACCCG CTGCAGCTGC TGCAGGTGGG CATCGAGCAT
GCCGATGCAC CCGAGAACGG CCAGCTGGCC GCCGTGGCGC TGAAGCCGGT GGGTGTGCTG
GCGATGCCCG GCCTGCTGGT GCGCGGCGCG CTCGGCCGGC TGGGGAACGC CGACGAGGTG
CTGAGCTTCC CGTTCGAGTC GATGACGGTG AAGGCCGGCC GCCTGCATCC GCCGCGCCGC
GTGAAGGTGG CCACCGACGG CGAGATCGCC TGGGCCGAGA TGCCGCTGCT GTTCCGGGTC
TCGCCCGAAC CGCTGTGGCT GGTACGGCCC GACGTCGCGC CCGAGCTGGA GGCCGCCAAG
CAATGA
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| Protein sequence | MQPSPLGPNS PLFVVLNAGS GSADAAETRE IIEQGCAAAG RRLRIFLVDE RTTVQALARE
AVERARAVDG VVVAAGGDGT LNTVARATLG SGLAFGVLPQ GTFNYFSRAH GIPRDTAQAL
QVLLDEQPRP VQVGLVNDRI FLVNASMGLY AELLEERESY KVRYGRSRWV AFFAGLLTVM
RGHRHWNLRI ASHGVERDIR TTTLFVGNNP LQLLQVGIEH ADAPENGQLA AVALKPVGVL
AMPGLLVRGA LGRLGNADEV LSFPFESMTV KAGRLHPPRR VKVATDGEIA WAEMPLLFRV
SPEPLWLVRP DVAPELEAAK Q
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