| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4701 |
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| Symbol | |
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| ID | 7971711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4991658 |
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| End bp | 4993130 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795286 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_002946572 |
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| Protein GI | 239817662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT CTCCTCTCGC ATTGCTGAAC GACCCGACCC TCCTGAAGAC AGACGCGCTG
ATTGCCGGCG AATGGATTCA AGGCAAGAGC CGCTTCGATG TGAACGACCC TGCCACAGGA
CAGAAGCTGG TCGACGTGGC CAACCTCACG CGCGCGGATG CCGCACTCGC CATTGCCGCC
GCCGACAAGG CCCTGGCCGC CTGGCGCGGC AAGACCGGCA AGGAGCGCAG CATCGTGCTG
CGCAGGTGGT TCGACCTCTT GATCGCCAAC ACCGAAGACC TCGGCCGCCT GATGACCGCC
GAACAGGGCA AGCCCTTTGC CGAGGCCAAG GGCGAGGTCG TCTACGGCGC GAGCTTCGTC
GAGTGGTTTG CCGAGGAAGC CAAGCGCGTG AACGGCGAGG TGCTGCCGCA GTTCGACAAC
AACCGGCGCC TCCTGGTGAT GAAGCAGCCC ATCGGCGTGT GCGCGGCGAT CACGCCGTGG
AATTTTCCGC TCGCCATGAT CACGCGCAAG GTGGCGCCGG CGCTGGCCGC GGGCTGCACG
GTGGTCATCA AGCCGGCCGA GCTCACGCCG CTCACGGCGC TGGCCGCCGC CGAACTGGCC
ATGCGCGCCG GCATTCCGGC GGGCGTGCTC AACGTGCTCA CGGCCGACAG TGGCAACAGC
ATCGCGATCG GCAAGGAGCT GTGCGAGAGC GGCGTCGTGC GCCATCTGAG CTTCACGGGC
TCCACTGAGG TCGGCCGCAT CCTCATGAGC CAGTGCGCGC CGACGGTCAA GAAGCTGTCG
CTGGAACTCG GCGGCAACGC GCCCTTCCTG GTGTTCGACG ATGCGGACGT GGATTCGGCC
GTCGAGGGCG CCATGGCCAG CAAGTACCGC AACGCCGGCC AGACCTGCGT GTGCGCGAAC
CGGCTGTATG TGCAGGAAGG CATCTACGAC GCCTTCGTCG AGAAGTTCGC GGCCAGGGTC
AAGGCGCTCA AGGTCGGCAA CGGCTTTGAA GATGGCGTGG TGCAGGGCCC GCTGATCGAG
GACGCGGCCA TCGACAAGGT GCAGCGGCAT GTGGCCGACG CCATTGCCAA GGGCGGCCGC
GTGCTGGCGG GCGGCCACCG GATGCAGGGC CAGTTCTTCG AGCCCACCGT GATTGCCGAC
GCCAGCGCCG ACATGCTGTG CGCGCGCGAA GAAACCTTCG GGCCGTTCGC GCCGGTGTTC
CGCTTCAAGA CCGAGCAGGA GGGCATCGAT GCGGCGAACA ACACCGAGTT CGGCCTCGCG
AGCTACTTCT ACACCCGCGA CGTCGGCCGG ATCTTCCGCG TGGCGGAAGC GCTGGAATAC
GGCATGGTGG GCATCAACGC CGGCGTGATC GCCACCGAGC ATGTGCCCTT CGGCGGCGTG
AAGCAGTCGG GCCTGGGACG CGAAGGCTCG CACCACGGCA TGGACGACTA CGTCGAGATC
AAGTACCTCT GCCTGGGCGA TATCCAGAAA TAG
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| Protein sequence | MKTSPLALLN DPTLLKTDAL IAGEWIQGKS RFDVNDPATG QKLVDVANLT RADAALAIAA
ADKALAAWRG KTGKERSIVL RRWFDLLIAN TEDLGRLMTA EQGKPFAEAK GEVVYGASFV
EWFAEEAKRV NGEVLPQFDN NRRLLVMKQP IGVCAAITPW NFPLAMITRK VAPALAAGCT
VVIKPAELTP LTALAAAELA MRAGIPAGVL NVLTADSGNS IAIGKELCES GVVRHLSFTG
STEVGRILMS QCAPTVKKLS LELGGNAPFL VFDDADVDSA VEGAMASKYR NAGQTCVCAN
RLYVQEGIYD AFVEKFAARV KALKVGNGFE DGVVQGPLIE DAAIDKVQRH VADAIAKGGR
VLAGGHRMQG QFFEPTVIAD ASADMLCARE ETFGPFAPVF RFKTEQEGID AANNTEFGLA
SYFYTRDVGR IFRVAEALEY GMVGINAGVI ATEHVPFGGV KQSGLGREGS HHGMDDYVEI
KYLCLGDIQK
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