| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4596 |
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| Symbol | |
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| ID | 7973294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4870855 |
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| End bp | 4873536 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644795180 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946467 |
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| Protein GI | 239817557 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCAATG CAGATCAGAA TGCCTTGGCG CCGATTGCCG AAGAGGTGCT GGGAAAACTT
GAAGAAGTCG CAACAGCAGC GCGTGCCTGG CTGCAGAACC CCAACGGTCT CAGTGCAGAC
TCACTGGTCC CGGGATCAGT CTCAGAAGCC GCACTGCGCA ACATCGGCCA GGTGACCCTG
CAGAACCGCA CGGCGTACCA GCGGTTGAGC AAAGAGCCAG TGGTTTCGCG TGTCGTCGCA
GAGGATGAAA AGGGGCGGCT GCACACGACA TTCTTCTGCC GCGCCGATCA GGGTTTGCCA
AAGCGTGGCG TCATCAGCTA CCTGACGAAC TGGGGCCGGC TGGCCTCGAT GCCGGTTGGG
GATGAGTTCG TGACGCCCGG CGGCGAGGCC TGGATCGTCG TCTCCAAGAC GGGCCTACGC
CCTGAGGAGA GCGATGGGCA ATGGGATGCC TACTCTGTCG TACAGCGCGA AGACTTGCCC
AGCGTCACCA TTGAGTCGCT TCGAGCACTC TTGCAGGCAG AGCTTACGAG TCGCAATGCG
CAAGATGACC TAGACAAAAT CCTCGCGGAC GAGGCCAAGA ATGCTGCTGT GGTAGCGGGA
CTTCGTCGGA GCGTTATTAC CCGCATGGGG CTGCGAGAGC AGCCCATTCT GGACAAGTTC
CAAGACGAGA TTTTCCGACT CCCGCTCTCT CACCAGATCG TGTTGCTCGG GCCGCCGGGT
ACCGGGAAGA CGACGACGCT GATCCGTCGT TTAGGGCAGA AGCTTGATAT CCAATTCCTT
GACGAGGACG AGCAGCGTGT GGTTCAGGAT GTGGCGGTGG AGCAGGGCTT GTCGCACGAG
AGAAGCTGGC TCATGTTCAC CCCTACTGAG CTGCTCAGGA TGTACCTCAA GGAAGCCTTT
GCCCGCGAGC AACTGCCCGC GTCCGACCAC AATCTCCGTA TTTGGGATGA CCATCGCCGC
GATCTGTGCC GACAGACCTT TGGCATTCTC AGGACGGCTA CCGGGAGTGG AGCCTTCGTC
CAGAAGACGG GCTTGGCCAG CCTGCAGGAC AGCACCATCA AAACCCAGGT GGAGTGGTTC
ACCGACTTCG ATGCCTGGCA GCGCCAAGCC TACTTGCATG AGCTGACTGG CGCCACCCAG
GTGCTCCAGT CGTCGAGCTT CAAGCAGGCC AGCGAATTGG GGGGGGTTGT GACAACGCTG
CTGAGTGAAC ACCAAAACTG GCCGTCAACT TTTAGCAGTC TCGCGGAAGA GCTGCCTAGG
ATGCAGTCCT TCGTGGCCAA CTTCAAGGAA GAGGTTGACC AGCGTCTTCG ATCCGCACTG
GTCGCACAGC TGCAAAAGAA CCGCAACTTC GTGAGCGAGT TCGCCGCGTT TCTGGAGACC
CTGCAACAGC TTGAAGCGGA CGAAAACGAC GAGGCCGAAC AGGAAGAAGA GGACGAGGTC
CAGGTGCCAA AAGTGGGCGC ACAGGCGGCG ACGAACGAGT ATTACCAGGC ACTCCGTGCT
CTGTCACGGA GCGCAGCCAC AAAGAGGGCG GTGAGCAAGA CCAATCGAAG TGGCAAGATC
ATCGACTGGC TGGGTGACCG CGTACTACCT CAGAGCGATC TCATCGACAT CGGGAACAAG
CTGATTCTTC AGACTGCAGC TCGCCGATTC GTCACCCCGG TCAGGGGCTA CATCGGCGGT
GTGAGCAAAC GATATCGCGC GTTTCGACGC GAGAGACAGG GCGAGAGCAT CTGGTATCAA
GCGAGTGGCT TTGATCAGCG GGACGTGCAT CCGCTGGAGC TGGATGTCAT CTTGCTGGCC
ACCCTCAAGG GGGGCAACGA GTTGATCAAT CGCCGCAACA TTCAGCGAAC CATCGACAGC
CCGCAATGGG CGCCGCTGAA GACCATCATG GGCTGCTACC GGCACCAGAT TCTGGTGGAC
GAGGCCACTG ACTTCTCACC GCTGCAGCTG GCATGCATGA ACGCGCTGGC GCACCCGCGC
ACCCGTTCGG TGTTCGCCTG CGGCGATTTC AACCAGCGAC TGACCACCTG GGGTGTTCGT
AGTTCCGAAG CGCTTTCGTG GAGCTTGCCC GGCTTGGAGG TTCGCGAGAT CACGGTTGCC
TACCGCCAGT CCAGACAGCT CAACGACCTC GCAAGAGACA TCATCCGTGC TGTAGGGGGG
ACAGTGCCAG ACGTCACTCT ACCTGCAGAA GTTGACACCG ACGTGGCTTC CCCCGTGCTG
CTGGAAAACA GCTCGCCCTC CGAAACCGTG AAATGGCTCG CGGACCGAAT CGTTGATATT
GAACGATTCG TGGAACAGCT CCCATCCATT GCTGTTTTCG TTAACAGCGA GGACGACGTC
GAGCCGACAG CGAAGGCGCT GGAGGTGCTG CTGAGTGAGC ACAACATCCC TGTCATGGCG
AGCAGTCGGG GGCAGATAGT CGGCCAAGAA AGCAGCGTGC GGGTGTTCGA CATCCAGCAC
ATCAAGGGTC TGGAGTTCGA GGCGGTTTTT TTCCTAGGCG TCGATCGTCT GGCAGAGCTG
TATCCGGAAC TGTTCGACAA GTACATCTAC GTCGGTACCA CCCGCGCAGC GGCTTACCTT
GGACTGGCCT GCGACGGCAC TCTGCCTGTG CAGCTCGCGC CAGTGCGTCA TCACTTCGCA
GCAGACTGGA CGCACAAGAT GCGCCCATCC GGTTCTGTAT GA
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| Protein sequence | MSNADQNALA PIAEEVLGKL EEVATAARAW LQNPNGLSAD SLVPGSVSEA ALRNIGQVTL
QNRTAYQRLS KEPVVSRVVA EDEKGRLHTT FFCRADQGLP KRGVISYLTN WGRLASMPVG
DEFVTPGGEA WIVVSKTGLR PEESDGQWDA YSVVQREDLP SVTIESLRAL LQAELTSRNA
QDDLDKILAD EAKNAAVVAG LRRSVITRMG LREQPILDKF QDEIFRLPLS HQIVLLGPPG
TGKTTTLIRR LGQKLDIQFL DEDEQRVVQD VAVEQGLSHE RSWLMFTPTE LLRMYLKEAF
AREQLPASDH NLRIWDDHRR DLCRQTFGIL RTATGSGAFV QKTGLASLQD STIKTQVEWF
TDFDAWQRQA YLHELTGATQ VLQSSSFKQA SELGGVVTTL LSEHQNWPST FSSLAEELPR
MQSFVANFKE EVDQRLRSAL VAQLQKNRNF VSEFAAFLET LQQLEADEND EAEQEEEDEV
QVPKVGAQAA TNEYYQALRA LSRSAATKRA VSKTNRSGKI IDWLGDRVLP QSDLIDIGNK
LILQTAARRF VTPVRGYIGG VSKRYRAFRR ERQGESIWYQ ASGFDQRDVH PLELDVILLA
TLKGGNELIN RRNIQRTIDS PQWAPLKTIM GCYRHQILVD EATDFSPLQL ACMNALAHPR
TRSVFACGDF NQRLTTWGVR SSEALSWSLP GLEVREITVA YRQSRQLNDL ARDIIRAVGG
TVPDVTLPAE VDTDVASPVL LENSSPSETV KWLADRIVDI ERFVEQLPSI AVFVNSEDDV
EPTAKALEVL LSEHNIPVMA SSRGQIVGQE SSVRVFDIQH IKGLEFEAVF FLGVDRLAEL
YPELFDKYIY VGTTRAAAYL GLACDGTLPV QLAPVRHHFA ADWTHKMRPS GSV
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